Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4296 |
Symbol | |
ID | 5541807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5541065 |
End bp | 5542390 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896402 |
Product | hypothetical protein |
Protein accession | YP_001434340 |
Protein GI | 156744211 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCG AACACGAGGT TACCGCCAGG GTTCCCTTCG CCGGTCCCGA TATTCCGAGT GATGCCGTGA TCAATTCGTG CGTGCACTGC GGTTTGTGTC TGCCCGCCTG TCCGACGTAC CGCGAGACCG GGCTTGAGCA GTTCTCGCCG CGCGGGCGTA TCTATCTGAT GAAAGCCGTT GCCGATGGAC GCATCGGCAT GGAAAGCGAT GTCTTTCAGG AGCAGATGAG CGCTTGTCTC AACTGCCGCG CCTGTGAAGC CGTTTGTCCT AGCGGTGTGC TGTATGGACA GATTCTGGAG ACGTCGCGCA CGCAGATCGA GCAGGCGAAG GCTGATGGGC GTCTCCCGCC ACACCCGTGG CCGGTGCGTC TTCTGCGCTT CGGTGCGTTT GGCGTCCTCT TTCGCCGTCC AGCGATGTTT CGTCTTTTCT CGCGTCTGAT GTGGCTCTAC CAGAAGAGTG GTGCGCAGTG GCTGGCACGG CGCAGTGGCG TGCTCCGCGC TCTGAAACTC GATGAGACCG AGGCGCTCTT GCCGCCGATC TGCGACCGGT TCACCGTCCC CGAAGGGCAG ATCCTTCCGG CTGAGGGCGC AGAACGTTTC ACCGTCGCGT TGCTCACCGG TTGCATCATG TCCACGGCGT TCGCCGATGT CCACGAGGCA ACCATTCGCG TGTTGCGCAA GAATGGCTGT ACGGTCTTCC TGCCGCCAGA TCAGGGGTGC TGTGGCGCGC TCCATGCCCA CGGCGGCGAC CTGAACGGTG CGCGCGACCT GGCGCGCCGG AATATCGCTG CATTCGAAGG GTTGGGTGTC GATGCGATTA TCGTCAATGC CGCCGGGTGC GGCTCGACGC TCAAGGAATA TGGGCATCTG CTCCACGATG ATCCGCAGTG GACGGAGCGC GCCGCTCGCT TTGCCACAAA AGTAAAGGAT GTGACGGAGT TCCTGGCGGC GCTCGACATA AATACCGCTG CGATGCGTCC GCTGAACCTG ACAGTGACGT ACCAGGAGCC GTGTCATCTG GCGCATGCAC AGCGCATCAG CACTCAACCG CGCCAACTGC TGCGCGCTAT TCCCGGCGTC GTGCTGCGTG AAATGCAGGA GTCGTCGCTC TGCTGCGGCT CGGCTGGCAT TTACAACGTG ACGCAACCCG ACATGGCGCA TCGCCTTGGT GAGCGGAAAC TGAACCACGC AGAAGCCACC GGCGCAGAGG TCATTGTCAC TGCGAATCCT GGCTGCCACC TGCAACTCGA AAGCGGGCTG CGACGCCGCG GATCGAAGAT GCAGGTGCGT CACATCGTCG AAGTGCTGGC GCAAGCGTAT AAGTGA
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Protein sequence | MIAEHEVTAR VPFAGPDIPS DAVINSCVHC GLCLPACPTY RETGLEQFSP RGRIYLMKAV ADGRIGMESD VFQEQMSACL NCRACEAVCP SGVLYGQILE TSRTQIEQAK ADGRLPPHPW PVRLLRFGAF GVLFRRPAMF RLFSRLMWLY QKSGAQWLAR RSGVLRALKL DETEALLPPI CDRFTVPEGQ ILPAEGAERF TVALLTGCIM STAFADVHEA TIRVLRKNGC TVFLPPDQGC CGALHAHGGD LNGARDLARR NIAAFEGLGV DAIIVNAAGC GSTLKEYGHL LHDDPQWTER AARFATKVKD VTEFLAALDI NTAAMRPLNL TVTYQEPCHL AHAQRISTQP RQLLRAIPGV VLREMQESSL CCGSAGIYNV TQPDMAHRLG ERKLNHAEAT GAEVIVTANP GCHLQLESGL RRRGSKMQVR HIVEVLAQAY K
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