Gene Rcas_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4296 
Symbol 
ID5541807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5541065 
End bp5542390 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content62% 
IMG OID640896402 
Producthypothetical protein 
Protein accessionYP_001434340 
Protein GI156744211 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCG AACACGAGGT TACCGCCAGG GTTCCCTTCG CCGGTCCCGA TATTCCGAGT 
GATGCCGTGA TCAATTCGTG CGTGCACTGC GGTTTGTGTC TGCCCGCCTG TCCGACGTAC
CGCGAGACCG GGCTTGAGCA GTTCTCGCCG CGCGGGCGTA TCTATCTGAT GAAAGCCGTT
GCCGATGGAC GCATCGGCAT GGAAAGCGAT GTCTTTCAGG AGCAGATGAG CGCTTGTCTC
AACTGCCGCG CCTGTGAAGC CGTTTGTCCT AGCGGTGTGC TGTATGGACA GATTCTGGAG
ACGTCGCGCA CGCAGATCGA GCAGGCGAAG GCTGATGGGC GTCTCCCGCC ACACCCGTGG
CCGGTGCGTC TTCTGCGCTT CGGTGCGTTT GGCGTCCTCT TTCGCCGTCC AGCGATGTTT
CGTCTTTTCT CGCGTCTGAT GTGGCTCTAC CAGAAGAGTG GTGCGCAGTG GCTGGCACGG
CGCAGTGGCG TGCTCCGCGC TCTGAAACTC GATGAGACCG AGGCGCTCTT GCCGCCGATC
TGCGACCGGT TCACCGTCCC CGAAGGGCAG ATCCTTCCGG CTGAGGGCGC AGAACGTTTC
ACCGTCGCGT TGCTCACCGG TTGCATCATG TCCACGGCGT TCGCCGATGT CCACGAGGCA
ACCATTCGCG TGTTGCGCAA GAATGGCTGT ACGGTCTTCC TGCCGCCAGA TCAGGGGTGC
TGTGGCGCGC TCCATGCCCA CGGCGGCGAC CTGAACGGTG CGCGCGACCT GGCGCGCCGG
AATATCGCTG CATTCGAAGG GTTGGGTGTC GATGCGATTA TCGTCAATGC CGCCGGGTGC
GGCTCGACGC TCAAGGAATA TGGGCATCTG CTCCACGATG ATCCGCAGTG GACGGAGCGC
GCCGCTCGCT TTGCCACAAA AGTAAAGGAT GTGACGGAGT TCCTGGCGGC GCTCGACATA
AATACCGCTG CGATGCGTCC GCTGAACCTG ACAGTGACGT ACCAGGAGCC GTGTCATCTG
GCGCATGCAC AGCGCATCAG CACTCAACCG CGCCAACTGC TGCGCGCTAT TCCCGGCGTC
GTGCTGCGTG AAATGCAGGA GTCGTCGCTC TGCTGCGGCT CGGCTGGCAT TTACAACGTG
ACGCAACCCG ACATGGCGCA TCGCCTTGGT GAGCGGAAAC TGAACCACGC AGAAGCCACC
GGCGCAGAGG TCATTGTCAC TGCGAATCCT GGCTGCCACC TGCAACTCGA AAGCGGGCTG
CGACGCCGCG GATCGAAGAT GCAGGTGCGT CACATCGTCG AAGTGCTGGC GCAAGCGTAT
AAGTGA
 
Protein sequence
MIAEHEVTAR VPFAGPDIPS DAVINSCVHC GLCLPACPTY RETGLEQFSP RGRIYLMKAV 
ADGRIGMESD VFQEQMSACL NCRACEAVCP SGVLYGQILE TSRTQIEQAK ADGRLPPHPW
PVRLLRFGAF GVLFRRPAMF RLFSRLMWLY QKSGAQWLAR RSGVLRALKL DETEALLPPI
CDRFTVPEGQ ILPAEGAERF TVALLTGCIM STAFADVHEA TIRVLRKNGC TVFLPPDQGC
CGALHAHGGD LNGARDLARR NIAAFEGLGV DAIIVNAAGC GSTLKEYGHL LHDDPQWTER
AARFATKVKD VTEFLAALDI NTAAMRPLNL TVTYQEPCHL AHAQRISTQP RQLLRAIPGV
VLREMQESSL CCGSAGIYNV TQPDMAHRLG ERKLNHAEAT GAEVIVTANP GCHLQLESGL
RRRGSKMQVR HIVEVLAQAY K