Gene Rcas_4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4285 
Symbol 
ID5541796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5527643 
End bp5528164 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content60% 
IMG OID640896392 
ProductGatB/YqeY domain-containing protein 
Protein accessionYP_001434330 
Protein GI156744201 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0630803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAC TCCAACAATT GCAGAACGAT CTCAAGGCGG CGTTGAAGAG CGGCGACCGA 
TTGCGGGTGG AGACGATCCG CATGGCGATC GACGCTTTGA AGAAGGCGCA AATGGCGCAG
GTGAAAGCCG CATTCGATGC GGCTGGCGGC GAGTCGGCGG ATGCCGCCGC ACTCGCGGAA
ATTGACCGTC ATGCGACTCT GACCGAAGCG GCAGAGCACG AGGTCCTTAC GAAAGAAGTG
AAACGCCGAC GCGAAGCCGC CGAACTGTAC CGGAAAGGAG GTCGGACCGA TCTTGCCGAA
AAGGAGGAGG CGGAAGCGGC GATTCTTCAG GCGTACCTGC CGCAGCAACT TTCGGAAGAA
GAATTGCGCC CCCTCGTCAA AGCGATCATC GATGAGATCG GCGCTGCCGG TCCTGCCGAT
ATGGGCAGGG TTATGCCGGT GTTGATGCAG CGGCTCAAGG GGCGCGCTGA TGGTCGCCTG
ATCAGTCAGA TGGCGCGCGA TCTTTTGAGC CATGCGCTGT GA
 
Protein sequence
MAILQQLQND LKAALKSGDR LRVETIRMAI DALKKAQMAQ VKAAFDAAGG ESADAAALAE 
IDRHATLTEA AEHEVLTKEV KRRREAAELY RKGGRTDLAE KEEAEAAILQ AYLPQQLSEE
ELRPLVKAII DEIGAAGPAD MGRVMPVLMQ RLKGRADGRL ISQMARDLLS HAL