Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4285 |
Symbol | |
ID | 5541796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5527643 |
End bp | 5528164 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896392 |
Product | GatB/YqeY domain-containing protein |
Protein accession | YP_001434330 |
Protein GI | 156744201 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0630803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATAC TCCAACAATT GCAGAACGAT CTCAAGGCGG CGTTGAAGAG CGGCGACCGA TTGCGGGTGG AGACGATCCG CATGGCGATC GACGCTTTGA AGAAGGCGCA AATGGCGCAG GTGAAAGCCG CATTCGATGC GGCTGGCGGC GAGTCGGCGG ATGCCGCCGC ACTCGCGGAA ATTGACCGTC ATGCGACTCT GACCGAAGCG GCAGAGCACG AGGTCCTTAC GAAAGAAGTG AAACGCCGAC GCGAAGCCGC CGAACTGTAC CGGAAAGGAG GTCGGACCGA TCTTGCCGAA AAGGAGGAGG CGGAAGCGGC GATTCTTCAG GCGTACCTGC CGCAGCAACT TTCGGAAGAA GAATTGCGCC CCCTCGTCAA AGCGATCATC GATGAGATCG GCGCTGCCGG TCCTGCCGAT ATGGGCAGGG TTATGCCGGT GTTGATGCAG CGGCTCAAGG GGCGCGCTGA TGGTCGCCTG ATCAGTCAGA TGGCGCGCGA TCTTTTGAGC CATGCGCTGT GA
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Protein sequence | MAILQQLQND LKAALKSGDR LRVETIRMAI DALKKAQMAQ VKAAFDAAGG ESADAAALAE IDRHATLTEA AEHEVLTKEV KRRREAAELY RKGGRTDLAE KEEAEAAILQ AYLPQQLSEE ELRPLVKAII DEIGAAGPAD MGRVMPVLMQ RLKGRADGRL ISQMARDLLS HAL
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