| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4280 |
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| Symbol | |
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| ID | 5541791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5521903 |
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| End bp | 5523033 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896387 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001434325 |
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| Protein GI | 156744196 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000117632 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0357828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCTCAT CCACCCGCCG CCGTCGCGCG CTTCCGCTCT GGCTGGTTCT CCTGGCATTG
CTGGGTCTGT GCGCGACTTA CGCCCAGGTT CACACCCCAT CGCACCCGGC GCCAGCCGAA
CCATCGCAAC CGCACCACAG TGCGATCGTC CGGCAGGTGC AGGTCTTCTT TACCACACCG
ACATTACGCT ACCCGGACGC GCCCAACCGC CGCGCGACGC CGCCAATGTT GCGTGAACTG
GTCGGCGATG TATCCCGCGC TCGCACATCA ATCGATGTGG CAGTGTTCGA CCTGGATCTG
CCGTCGCTCG TCGAGGCGCT GATTGCCGCC AGGAAGCGCG GAGTGAACGT GCGCGCAGTC
ATCGACAGCG AAAACCTCGG CGATCCGGCG GTTGCCATGC TGACCGGACG CATGCAGGAT
CGGCGGATTC CGGTCGTATT CGATCATCGC GCGCCGTTCA TGCACAACAA GTTTGTCGTG
ATCGACAGCA CAATTGTATG GACCGGTTCG TGGAACCTGA CCGAGAACTG CACATTTCGC
AACAACAATA ACGCGATTCG GATCGAGAGC CGCCGGATCG CCGCCGCCTA TCGCCGTGAA
TTCGATCAAA TGTACATGGG GCGTTTCGGT AATGCGAAAC AGAGCGATAG CGAACGTTTA
GCGGCACAGG CAGCCGATAG CACGATCACA ATCTATTTTT CGCCACAGGA TAAGGCTTTG
CCCATAATTC TCGATTACAT CGCACACGCG CACAGTACCA TCGTGTTTAT GGCATTTTCG
CTCACATCGG CGCCTGTTAC CGATGCCCTG ATCGATGCAG TGGAGCGTCA GGTCCGCGTA
AGCGGAGTTG TCGAGAAACG CAATGCCAGG GGAACAGGAT CGGTGTTTGC TCACCTGTCC
GAACATGGGA TAGACATTCT GGAAGATGGC AACTGTTACA ATATGCACCA CAAAGTGATG
ATTATTGATG ATGAGGTCGT GATCACCGGC TCATACAACT TCACCGACAA TGCAGAAAAC
ACAAACGACG AAAACCTGGC GATCATACAC GACACGACCA TCGCCAGGCT CTTTCTGGAT
GAGTATGCGC GCATTCGACA ACAGGCGCTC GAACCGAACC GCTGCAACTA A
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| Protein sequence | MPSSTRRRRA LPLWLVLLAL LGLCATYAQV HTPSHPAPAE PSQPHHSAIV RQVQVFFTTP
TLRYPDAPNR RATPPMLREL VGDVSRARTS IDVAVFDLDL PSLVEALIAA RKRGVNVRAV
IDSENLGDPA VAMLTGRMQD RRIPVVFDHR APFMHNKFVV IDSTIVWTGS WNLTENCTFR
NNNNAIRIES RRIAAAYRRE FDQMYMGRFG NAKQSDSERL AAQAADSTIT IYFSPQDKAL
PIILDYIAHA HSTIVFMAFS LTSAPVTDAL IDAVERQVRV SGVVEKRNAR GTGSVFAHLS
EHGIDILEDG NCYNMHHKVM IIDDEVVITG SYNFTDNAEN TNDENLAIIH DTTIARLFLD
EYARIRQQAL EPNRCN
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