Gene Rcas_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4276 
Symbol 
ID5541787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5518311 
End bp5518697 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content59% 
IMG OID640896383 
Productresponse regulator receiver protein 
Protein accessionYP_001434321 
Protein GI156744192 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.541765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0524203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACC GCACCATTCT CATCATCGAC GAAGACCCTG ATCACCGCGC TATCCTTGCC 
CGCCTGCTGC GCTTTTCCGG CTACCACGTT ATCGAAGCCG CGCCATCCAA CGCCCCGGAC
CGCTTCTCCT CCGGCATACG CCCTGATCTC ATCCTCTGTT CGCTCTCGCT TCCCGGTCAA
TGCGCCTGGG AAACAGTCCG TCAACTGCAC ACCCTCTCGG AGATTGCAGC CGTTCCCATC
CTTGCCACAA CCGTCTACAC CACCCTCATC AAGCGATCCC AGGTCCAATC GATCGGCTGC
GTCGATTATG TCGACAAGCC CTTCGACCTG GATGGATTGA TCACATACGT TCGAAACCTG
TTGTCGCCTC CAGCGATTGC GGCATAG
 
Protein sequence
MAHRTILIID EDPDHRAILA RLLRFSGYHV IEAAPSNAPD RFSSGIRPDL ILCSLSLPGQ 
CAWETVRQLH TLSEIAAVPI LATTVYTTLI KRSQVQSIGC VDYVDKPFDL DGLITYVRNL
LSPPAIAA