Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4275 |
Symbol | |
ID | 5541786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5517169 |
End bp | 5518233 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640896382 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | YP_001434320 |
Protein GI | 156744191 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0379488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAT CGTCAGACAA CTGGGGCATG ATCGGGCACG AGTGGGCGGT CGAGTTTCTG CGACGCTCGA TTGCCGGCAA GCGCCTGGCG CATGCGTATC TCATCGGCGG ACCGGAAGGC GTAGGGAAGG CGCTGCTCGC GCTTCGGTTG GCGCAGGCGC TCAACTGTGA ACGGTCAGCC CTCGATCCGT GTCTGCGCTG CCGGGCGTGT CAGCGGATCG AGCGTGGCAA CCACCCGGAT GTCCGCATCG CTGGCATGGC AACGCAGGCA GCCGGGGCAA AATCTGACGA TGCGGCGCGG CAGAAAGAGT TGAAGATCGA TACGGTGCGC GAGTGGCAAC GCGATATGAT GCTGAAGCCC TACGAGGGTC GGCGGCGCGT GTTCATTCTG CACGATGCAG AGAAGTTGAA CGAATCTGCA TCGAATGCGA TGCTGAAAAC CCTGGAAGAG CCGCCTCCCT ATGCAACGAT TGTTCTGGTT GCGCACACGG TGGGCAGCCT CCTGCCGACG ATTGTTTCGC GCTGTCAGTT GCTGCGGCTG CGCCCGTTGC CGCGCGCGCA GGTGGCGGCG GCTTTGCGCG AGAAGCGTAA CCTGGCGGCC GGCGATGCCG AACTCCTGGC TGCCTGGAGC GGCGGACGGA TCGGGTGGGC ATTGCGTATG GTCGATACAC CGGATGAACT GGCGGCGCGC CGGGATCAAC TGGCGGAACT GCTGGCGCTT GCCGACCAAC CACTGGCAAC CCGTCTGCGC TGGGCGGAGG AACAGGCGAA GGCGTATCGC GCCGGCGATC AGACGGCCGT GTTCGAGACG CTCGATCTGT GGCAGAGTTG GTGGCGCGAT GTGCTGCTGA CTGCCGCCGG TTGTCCGCAG GCGGTTGTCC ATATCGACCG CCGTGACGAA CTGGTAGCAG CAGCGGCGCA GCACACCGTT CCTGATCTTC ACGCCTTCGT ATCAGGCATT GCTCTGGCAG CGCAGCGTCT GCGCGATAAT GTGAATCCTC AACTGGCACT GGAGGGTGTG GCGCTGGCGA TACCGGAACG ACGAACGCCA CAATCAAGGA AATGA
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Protein sequence | MIESSDNWGM IGHEWAVEFL RRSIAGKRLA HAYLIGGPEG VGKALLALRL AQALNCERSA LDPCLRCRAC QRIERGNHPD VRIAGMATQA AGAKSDDAAR QKELKIDTVR EWQRDMMLKP YEGRRRVFIL HDAEKLNESA SNAMLKTLEE PPPYATIVLV AHTVGSLLPT IVSRCQLLRL RPLPRAQVAA ALREKRNLAA GDAELLAAWS GGRIGWALRM VDTPDELAAR RDQLAELLAL ADQPLATRLR WAEEQAKAYR AGDQTAVFET LDLWQSWWRD VLLTAAGCPQ AVVHIDRRDE LVAAAAQHTV PDLHAFVSGI ALAAQRLRDN VNPQLALEGV ALAIPERRTP QSRK
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