Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4271 |
Symbol | |
ID | 5541782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5513061 |
End bp | 5514263 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640896378 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001434316 |
Protein GI | 156744187 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.614702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGTCG GGATCGATTT TACGGCTGGC GCCTGGCAGG GCGCCGGCAT TGGGCGTTAC ACGCGCGAAC TGATCGGCGC CATTCTTGCT CAAAGCCCCG ATCTTCGTTT CACTCTGTTC TACGCTGCTG GCTTTCCGGG CGCCGCTCCT CCGCCCTATC TGCCTGAGGT GCGCCGTCTC TGCGCATCGC ATCCGCGTAC CCGCGCTGTG CCCATTCCGC TGCCGCCCCG CCGCCTGACG CAACTCTGGC ATCGGTTGCG CGTCCCGCTG CCGATCGAAT GGCTTACCGG TCCACTCGAT ATTCTGCACG CGCCCGATTT CGTGGCGCCG CCGACGCGCG CCCGCACTCT TGTGACCATC CACGATCTTT CGTATATGGT GCATCCCGAG TGCGCCGTTC CCGGCGTTGC CGCCTTTCTG CGCGACGCCG TGCCGCGTAC ACTGCGACGC GCTGATGTCA TCGTCGCCGA TTCGGAGTCG ACCCGGCGCG ATCTCCAGCG CCTGTTGCAC ATCGCTCCTG AGCGTGTGTC GGTGGTCTAT CCTGCGGTAG ACGAACGGTT TTGTCCCTTG CCGCCGGAGA TGTGCGAGCC GGTGCGCCGG CGGTTGCGCC TGCCATCGCG CTTCATCCTG TTCGTCGGAA CAATCGAGCC ACGCAAGAAT CTGGCGCGTC TGCTGGAAGC CTTTGCGCGG ATCGATCCGG CAACACGGCG ACAAGGCAAC GGTGATCTCT TCCTGGTCAT CGCCGGTCGG CGGGGATGGA TGTACCAACC GGTGTTCGAG ACTCTTGATC GCCTGGGACT GCGAGATCGG GTGCAGATAC TCGATTTTGT GGCGGATTCT GACCTGCCAG TGGTGTATAA TCTTGCACAG GCATTCGTGT ATCCTTCGAT CTACGAAGGA TTCGGCTTGC CGCCGCTGGA AGCGCTGGCA TGCGGAACAC CGGTAGTTAC ATCAGACAAT TCGAGCCTTC CAGAGGTAGT GGGCAGCGCC GCCCTTCTTG TGCCTGCCGA CGATGTGGCG GCGCTCACAC AGGGGATGAG CCGCCTGTTG AACGATGACG CCCTGCGTGC TCAACTGCGT CAGGCGGGTC TGGAGCAGGC GCGACGATTT CGCTGGGAAG CGTCTGCCCG GCAGATGATC GAACACTATC ACTCGTTGTC AACGGGAGCA TCGCATGAGG CCACAACCAG AGCTCTCCGG TGA
|
Protein sequence | MHVGIDFTAG AWQGAGIGRY TRELIGAILA QSPDLRFTLF YAAGFPGAAP PPYLPEVRRL CASHPRTRAV PIPLPPRRLT QLWHRLRVPL PIEWLTGPLD ILHAPDFVAP PTRARTLVTI HDLSYMVHPE CAVPGVAAFL RDAVPRTLRR ADVIVADSES TRRDLQRLLH IAPERVSVVY PAVDERFCPL PPEMCEPVRR RLRLPSRFIL FVGTIEPRKN LARLLEAFAR IDPATRRQGN GDLFLVIAGR RGWMYQPVFE TLDRLGLRDR VQILDFVADS DLPVVYNLAQ AFVYPSIYEG FGLPPLEALA CGTPVVTSDN SSLPEVVGSA ALLVPADDVA ALTQGMSRLL NDDALRAQLR QAGLEQARRF RWEASARQMI EHYHSLSTGA SHEATTRALR
|
| |