| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4268 |
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| Symbol | |
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| ID | 5541779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5509423 |
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| End bp | 5510934 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896375 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001434313 |
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| Protein GI | 156744184 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.209068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTTC GACAGAGCCG GTCGGAAAAG ACACGGATGC ACGGACTTCG CGCAATCGCT
CCTTCCCTGC GAACGACCAT CACGCTCTGG CTGGTCGCCG TCGCTCTGGG GATACTGCTG
GCGCGCACTC CGCTCGATAC GCTTGCACTG ATGGCGGGTG CGGCGCTGGC GCTCATTCTG
GCGCTGGTGC ATCCGGTCCT GGCAGTTGGT ATGGCGGCGC TGTCGGTGCC GGTGCAGGAG
CTGATTACCC TTCCGGGCGG GCTATCGGTT ACACAGATGA CGGTGCTGTT GGCGCTGGGG
GGCTGGTTGT TCCATACTCT GGCGCGCGCT GAACAGCGCA TGCTTCCAAC CGATCTCTTG
CTTCTATGGG GTGGGGTGCT CTTCGCACTG CTGCTCTCTG CCAGTGTGAC GCCGTATTCG
CGCACGGAAG CGCTGCGCGA GACGGCACGC TGGATGGTTG CGGCAGGCGT CTGGATGGCG
GCTGCGAGCA CGATCACCCG GCGCTGGCAT ATCATCTACC TGCTGGCATG TCTGTTGATC
GCTCCGGCAG TGTGCGCCGG CATTGGCATC GTGCAGTTCG CAACCGGCGA TGGTCCGCCG
ACCTTTCGGA TCGCGCCCGA TCTGCCATAT GTGCGCGCCT ATGGCACAAT TGGACAGCCG
AACTCATTTG CGGGATACCT GAACATGGCA TGGCCCCTGG CGCTTGCGCT GGCGATGGTA
ACCGCCAATA GCGCCCGGCA GAGCGGCGTT CGGCGGTGCC TGGCCGCTAC GGGGCGCTGG
ATGTTGGTGG TCGTCGTGTG GGGAGTCGTC GGGGTGTTGC TGACGGCGTT GATGATGTCG
TTCTCGCGTG GTGCGTGGAT CGGCGCCGCA ATTGGGGTGA CAGGCATGGC GCTAAGCCTG
GGCAGGCGCG CGCTGCCGGC GCTCCTGGGA CTGGTGGCGG TTGGCGTGGC AGTGGTGTTG
CTCGCCATTG TGGGCGCGCT CCCCGAAGCG CTGATGACGC GCCTGGCGAG CGTCTGGCAG
AGTGTGGCAT GGTTCGATGC GGCGGCAGTG ACGGTGACAC CAGAGAACTT CGCAGTCGTC
GAGCGAATGG CGCACCTCCA GGCAGGGTGG GAGATGTTTC GTTCCGCACC GCTGTTCGGC
GTTGGTCCTG GCAATTACTC TGTCGCATAT CCAGAGTTTG CCGTTGGCGG ATGGTATGCG
AGTCGCGGGC ATGCCCACAA TTACTACCTG CACATGGCAG CGGAAACAGG AATAATCGGC
ATAGTGGCAT ACCTGGCGCT CCTCGGCGGA GTGATCCGGC AGGCATTGCG CGCGCTTCGA
CGCACAACCG ATCCCATTTT GTACGGCGCA ACCGTCGGCG GATGTGGTAT CATCGCAGCA
GTAGCAGGGC ATAATCTGTT CGAGAACCTG CACGTACTCA ATTTTGGCAT TCAACTCGCG
GTCGTATGGG CGGTGATCGG CGCGATTGCG CACTGTACTG AAGACATTCA ATCACAATGC
GCTATCTCAT AA
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| Protein sequence | MMVRQSRSEK TRMHGLRAIA PSLRTTITLW LVAVALGILL ARTPLDTLAL MAGAALALIL
ALVHPVLAVG MAALSVPVQE LITLPGGLSV TQMTVLLALG GWLFHTLARA EQRMLPTDLL
LLWGGVLFAL LLSASVTPYS RTEALRETAR WMVAAGVWMA AASTITRRWH IIYLLACLLI
APAVCAGIGI VQFATGDGPP TFRIAPDLPY VRAYGTIGQP NSFAGYLNMA WPLALALAMV
TANSARQSGV RRCLAATGRW MLVVVVWGVV GVLLTALMMS FSRGAWIGAA IGVTGMALSL
GRRALPALLG LVAVGVAVVL LAIVGALPEA LMTRLASVWQ SVAWFDAAAV TVTPENFAVV
ERMAHLQAGW EMFRSAPLFG VGPGNYSVAY PEFAVGGWYA SRGHAHNYYL HMAAETGIIG
IVAYLALLGG VIRQALRALR RTTDPILYGA TVGGCGIIAA VAGHNLFENL HVLNFGIQLA
VVWAVIGAIA HCTEDIQSQC AIS
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