| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4267 |
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| Symbol | |
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| ID | 5541778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5508468 |
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| End bp | 5509421 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640896374 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001434312 |
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| Protein GI | 156744183 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.307285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.160905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTAC TGATCACCGG CGGCGCCGGC TTTCTTGGTT CTCATTTGTG TGATCGATTC
CTGGCGGAAG GTCATACCGT CGTGGCGATG GACAATCTGA TTACCGGCAA CACCGACAAT
ATTGCCCATC TTGCCGGTCA TCCGCGCTTC AGTTTCATCA AGCACGACGT GACGAACTAT
ATTTTTGTCG AGGGTCCGCT CGATGCCATT TTGCACTTCG CCTCACCCGC CTCACCGGTC
GATTATCTGG AGTTGCCGAT TCAAACGCTG AAAGTCGGCG CACTCGGCAC GCACAAGGCA
TTGGGGCTGG CAAAGGATAA AAAAGCGCGC TTCCTGCTCG CTTCGACTTC AGAAGTGTAC
GGCGATCCAC AGGTGCATCC GCAACCTGAA ACATACTACG GACACGTCAA TCCCATTGGT
CCACGTGGTG TGTACGATGA AGCCAAGCGC TTCGCCGAGG CGATGACCAT GGCGTACCAT
CGCTATCACG GCGTCGAGAC GCGCATTGTA CGCATTTTCA ACACCTATGG TCCGCGCATG
CGTCTCCGCG ATGGTCGGGT GGTGCCCAAT TTCATTCAGC AAGCATTGCG CGGCGAGCCG
CTGACCATTT ATGGAGATGG CTCGCAAACG CGATCATTTC AATATGTCGA TGATCTGGTG
GAAGGGGTCT ATCGCCTGCT CTTTTCCAAC GAAGTCGAGC CGGTCAATAT TGGCAATCCC
GGCGAGTTTA CCATTAAAGC GTTCGCCGAA CTGGTCAATG CGTTGACCGA CAACAAGGCT
GGTGTGGTGT ACAAAGATCT GCGCACACAG GACGATCCGC AGGTGCGTCA GCCGGACATT
GCGAAGGCGC GCAGGATTCT GGGGTGGGAG CCGCGCGTCA GCCTCGAAGA AGGGTTGCGT
CGCACCATTC CATGGTTTCG TGAAGAACTG CGGAAACGCG GAGAACTGCC GTGA
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| Protein sequence | MRVLITGGAG FLGSHLCDRF LAEGHTVVAM DNLITGNTDN IAHLAGHPRF SFIKHDVTNY
IFVEGPLDAI LHFASPASPV DYLELPIQTL KVGALGTHKA LGLAKDKKAR FLLASTSEVY
GDPQVHPQPE TYYGHVNPIG PRGVYDEAKR FAEAMTMAYH RYHGVETRIV RIFNTYGPRM
RLRDGRVVPN FIQQALRGEP LTIYGDGSQT RSFQYVDDLV EGVYRLLFSN EVEPVNIGNP
GEFTIKAFAE LVNALTDNKA GVVYKDLRTQ DDPQVRQPDI AKARRILGWE PRVSLEEGLR
RTIPWFREEL RKRGELP
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