Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4254 |
Symbol | |
ID | 5541765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5496017 |
End bp | 5496748 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640896361 |
Product | hypothetical protein |
Protein accession | YP_001434299 |
Protein GI | 156744170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG AGTTGAGCGT TGGCGAAGTG CTGGCGCTGC TGACAAACGG CAAGATGGAA ATTCAGGGCA TGATGCCCTG GAGCAGTAAT TACACGCTGC TCGTCACCGT GCGCGACGGC GACCTGGAAG GTCTCGCGGT ATACAAGCCG CGGCGCGGCG AGCGCCCGCT GTGGGATTTC CCGCGTGGAA CGTTGTGTCA GCGCGAGTTC GCCGCCTTCC TGCTCAGTGA AGCGCTCGGC TGGTCGCTCG TTCCGCCAAC CGTCCTGCGC GATGGTCCCT ACGGATACGG CTCGGTGCAA CTGTATATCG ACTGTGATCA GGATGCGCAT CTGTTCACTA TGCAGAAGGA GGGTGGCTAC GACGATCAAC TCGCGCGTCT GGCCGCCTTC GATATCCTTT CAAACAACGC CGACCGCAAA AGTGGTCATT GCCTGAAGGG TACGGATGGC CGACTCTGGG CGATTGACCA CGGCATCTGT TTCCATGCCG AACCAAAATT GCGCACGGTG CTGTGGGATT TCGCCGGTGA GCCGATCTGC GAAGAGATTA TGGTCGATCT GTGCGCACTG CGTGAAGACG TGCGCAACGG CGGGCGCTTC ATTCGCGCGC TCGAAGGATT GCTTGCCCCC GAAGAAGTGC GCGCCTTTCG CCGCCGCCTC GACCGCCTGA TCGAAACCGG CTGCTACCCC GATCCCGGCG CTGCGCGTAC CATCCCCTGG CCTCCTGTCT AG
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Protein sequence | MSKELSVGEV LALLTNGKME IQGMMPWSSN YTLLVTVRDG DLEGLAVYKP RRGERPLWDF PRGTLCQREF AAFLLSEALG WSLVPPTVLR DGPYGYGSVQ LYIDCDQDAH LFTMQKEGGY DDQLARLAAF DILSNNADRK SGHCLKGTDG RLWAIDHGIC FHAEPKLRTV LWDFAGEPIC EEIMVDLCAL REDVRNGGRF IRALEGLLAP EEVRAFRRRL DRLIETGCYP DPGAARTIPW PPV
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