Gene Rcas_4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4254 
Symbol 
ID5541765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5496017 
End bp5496748 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID640896361 
Producthypothetical protein 
Protein accessionYP_001434299 
Protein GI156744170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG AGTTGAGCGT TGGCGAAGTG CTGGCGCTGC TGACAAACGG CAAGATGGAA 
ATTCAGGGCA TGATGCCCTG GAGCAGTAAT TACACGCTGC TCGTCACCGT GCGCGACGGC
GACCTGGAAG GTCTCGCGGT ATACAAGCCG CGGCGCGGCG AGCGCCCGCT GTGGGATTTC
CCGCGTGGAA CGTTGTGTCA GCGCGAGTTC GCCGCCTTCC TGCTCAGTGA AGCGCTCGGC
TGGTCGCTCG TTCCGCCAAC CGTCCTGCGC GATGGTCCCT ACGGATACGG CTCGGTGCAA
CTGTATATCG ACTGTGATCA GGATGCGCAT CTGTTCACTA TGCAGAAGGA GGGTGGCTAC
GACGATCAAC TCGCGCGTCT GGCCGCCTTC GATATCCTTT CAAACAACGC CGACCGCAAA
AGTGGTCATT GCCTGAAGGG TACGGATGGC CGACTCTGGG CGATTGACCA CGGCATCTGT
TTCCATGCCG AACCAAAATT GCGCACGGTG CTGTGGGATT TCGCCGGTGA GCCGATCTGC
GAAGAGATTA TGGTCGATCT GTGCGCACTG CGTGAAGACG TGCGCAACGG CGGGCGCTTC
ATTCGCGCGC TCGAAGGATT GCTTGCCCCC GAAGAAGTGC GCGCCTTTCG CCGCCGCCTC
GACCGCCTGA TCGAAACCGG CTGCTACCCC GATCCCGGCG CTGCGCGTAC CATCCCCTGG
CCTCCTGTCT AG
 
Protein sequence
MSKELSVGEV LALLTNGKME IQGMMPWSSN YTLLVTVRDG DLEGLAVYKP RRGERPLWDF 
PRGTLCQREF AAFLLSEALG WSLVPPTVLR DGPYGYGSVQ LYIDCDQDAH LFTMQKEGGY
DDQLARLAAF DILSNNADRK SGHCLKGTDG RLWAIDHGIC FHAEPKLRTV LWDFAGEPIC
EEIMVDLCAL REDVRNGGRF IRALEGLLAP EEVRAFRRRL DRLIETGCYP DPGAARTIPW
PPV