Gene Rcas_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4253 
Symbol 
ID5541764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5495503 
End bp5496015 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content59% 
IMG OID640896360 
Producthypothetical protein 
Protein accessionYP_001434298 
Protein GI156744169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGT TCACCTATGA TCTCGACCCG GTGACGCGCA TCACGGCGAG CGCAGTCGGT 
CCGCCGGGGC AGCGCGTCTT CTACATCCAG GCGCGCCGTG GGCGTGAACT GGTGTCACTG
ATCGCGGAAA AGGAACAGGT TCGCGCGCTT GCGCAGGCGA TTGACCGCCT GCTCGAGGAA
CTGGCGGAGA AAAATCCGTT GCTTTCTTCG TCCGACGATC TCTTGCTGGT CAGCGATATG
AACCTGGAAG AACCGATTGA ACCGCGGTTT CGTATTGCTC AGATGGGAAT TGGGTATGAT
GCCGAGCGCG ATATGGTCAT CCTGGTGATG CAGGGGTATC GTGAGGACGA GAGTGAAGAG
GAGCCGCCAA CCGCGCGCTT TGGCGCTTCT CGTCAGCAAA TGCGCGCTTT GAGCGAACAT
GCGGCGAATG TGGTTGCGCG TGGACGCAAA ATCTGCGGCA ACTGCGGTCG TCCCGTCGAT
CCCGGTGGTC ACTTCTGCCC GCAAATGAAC TGA
 
Protein sequence
MTKFTYDLDP VTRITASAVG PPGQRVFYIQ ARRGRELVSL IAEKEQVRAL AQAIDRLLEE 
LAEKNPLLSS SDDLLLVSDM NLEEPIEPRF RIAQMGIGYD AERDMVILVM QGYREDESEE
EPPTARFGAS RQQMRALSEH AANVVARGRK ICGNCGRPVD PGGHFCPQMN