Gene Rcas_4250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4250 
Symbol 
ID5541761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5492439 
End bp5492600 
Gene Length162 bp 
Protein Length53 aa 
Translation table11 
GC content52% 
IMG OID640896357 
Producthypothetical protein 
Protein accessionYP_001434295 
Protein GI156744166 
COG category[S] Function unknown 
COG ID[COG4338] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGGCG TTAAAAAGCA GCATTTGCCG GAAAAGATTT GTGCAACGTG TGGTCGTCCT 
TTCACCTGGC GCAAGAGTCT GGCGAAGAAT TGGAACGATG TGAAGTACTG TAGCGATGCC
TGCCGCAAGT ATCGGCGGCA CGGCAGAAAT GTTCACCGGT AA
 
Protein sequence
MRGVKKQHLP EKICATCGRP FTWRKSLAKN WNDVKYCSDA CRKYRRHGRN VHR