Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4237 |
Symbol | |
ID | 5541748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5476022 |
End bp | 5477134 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640896344 |
Product | hypothetical protein |
Protein accession | YP_001434282 |
Protein GI | 156744153 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.120446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAGC GCATTGTCGT AAAGGGTTAT AAATCCATTC GGGAAGCCGA AATCAACCTG CGCCCGGTCA ACGTCCTCAT TGGCGCCAAT GGCGCAGGCA AATCCAACTT CATTGGCCTG TTCCAGTTTA TGAACCGCGT TGTCAATCAG GGTATGCAAG TCTACGTAGC GCAGGCCGGC GGCGCCGATC AACTTCTGCA CTATGGCCGT AAAATAACCG AGCAGATATA CCTTGAACTT TGGTTTTCCA GGCCCAATAA TCTGGCAAAC GGTTATGAAT GTACGCTGCT CCCAACCGAT GATGACCTAC TGGTCTTTAA AGAAGAGGTT GTCTACTTCC ATGACCGAAA CGAATATGAT CACCCTTATG AAAGTCGGCG TTCATCACAG GTACATCATG AAACGTTACT TCTAGACTGG CAGCGAAATG GTGACCGGGT TGCGTATCAT GTTTTGCGCG CGTTGGCCTC TTGGCAACTG TATCATTTTC ACGATACCAG TCCATCAGCT CGCATTAAAC AAACCGGAGA CATCCACGAT AACCTCTTTT TAAGACCAGA TGCGTCTAAC CTGGCAGCGT ATCTCTACGT TTTGCGTGAA ACTGAAGAAG CGTATTATCG CAATATCGTG GATACTATCC GTCTCGTCGC GCCTTTTTTT GGTGATTTCG TGCTGCGCCC GTCACCATTC AATCCGGCAA AAATTCGTCT AGAGTGGCAG GAGCGCGGTT CCGATGCGCT CTTTGGCCCG CATGTCTTTT CAGATGGCAC GCTGCGTTTT ATCTGTCTGG CAACGCTCTT TTTGCAGCCA CCCGAACGGT TTCCGGCTAC CATCGTGCTC GATGAGCCGG AACTAGGGTT ACATCCTTAT GCTATCGCTA TCTTGGCCGA CATGGTGCGC AGTGCGGCGG AACATACGCA GATTATCTTA GCCACGCAGT CAGTTACCCT CGTTAATCAG TTCGAACCGG ACGACATTTT GGTCGTAGAT CGTGTCCAAG GGGAAACACT ATTCAGCCGA CTGGAAAAAG AGCAGATGGC ATCTTGGCTG GAAGATTACG GACTCGGCGA TCTGTGGGAA AAGAATCTAC TGAGAGGACG ACCGGCGCGA TGA
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Protein sequence | MVERIVVKGY KSIREAEINL RPVNVLIGAN GAGKSNFIGL FQFMNRVVNQ GMQVYVAQAG GADQLLHYGR KITEQIYLEL WFSRPNNLAN GYECTLLPTD DDLLVFKEEV VYFHDRNEYD HPYESRRSSQ VHHETLLLDW QRNGDRVAYH VLRALASWQL YHFHDTSPSA RIKQTGDIHD NLFLRPDASN LAAYLYVLRE TEEAYYRNIV DTIRLVAPFF GDFVLRPSPF NPAKIRLEWQ ERGSDALFGP HVFSDGTLRF ICLATLFLQP PERFPATIVL DEPELGLHPY AIAILADMVR SAAEHTQIIL ATQSVTLVNQ FEPDDILVVD RVQGETLFSR LEKEQMASWL EDYGLGDLWE KNLLRGRPAR
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