Gene Rcas_4231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4231 
Symbol 
ID5541742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5471339 
End bp5471959 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID640896338 
Producthypothetical protein 
Protein accessionYP_001434276 
Protein GI156744147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTGAAT GGGCGGTATC TGGCGCGTAT ATCCGTCCCG GTCTCGACGT GTTTGTGATT 
GTATCCGGTG ATGGCGGATT TGCCGCTCTG GCCAAAAAGC TGCACGAATA TGGCAAGACG
GTCATCGGTT GCGCTTACCG TTCGGCAGTC AACAAGACGT TTCAAGCGGT GTGTGACGAA
TTCGTTTGGA TTACCGACCC GGAAGAGAAG GTTCAGCCGG CGCATGTGCC CGATCAACTT
GGGGTCACCG ACCCGCGCAA TATTCGCCTC GCCGAACAGG TGGCGAGAGT AACCGTGCCT
ACACCAGAGA ACATTGTCGC CAAAACTAGA GAGATCCTCG ATTGGTACGC ACAGAATACA
ACAACGTCAG TCGATTTGGT TCAGAAAGGA ATAACACTTT CGGTCATTAA AGAAGCTGTC
ATGTATGCCA TTCCCGACTT TCAACCGGGC AGATTGGGAT TTGCGAAGTT TATCGAATAT
ATGCAGTTCG TTTGCCAGGG AACGATCTAC TGCATCGTGC GTCTGCCAAC TTCACAGGTC
GTGCTCGCCC TGCGCTGCGC TGTTCCCAAT GGGAGTGAGG TGCTGCCGGA TTTGGATGCG
CACGAAATGG AGTGCGGTTG A
 
Protein sequence
MCEWAVSGAY IRPGLDVFVI VSGDGGFAAL AKKLHEYGKT VIGCAYRSAV NKTFQAVCDE 
FVWITDPEEK VQPAHVPDQL GVTDPRNIRL AEQVARVTVP TPENIVAKTR EILDWYAQNT
TTSVDLVQKG ITLSVIKEAV MYAIPDFQPG RLGFAKFIEY MQFVCQGTIY CIVRLPTSQV
VLALRCAVPN GSEVLPDLDA HEMECG