| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4215 |
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| Symbol | |
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| ID | 5541726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5450649 |
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| End bp | 5451458 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896322 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001434260 |
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| Protein GI | 156744131 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.261755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAGC AGCGGAACAA GAAAGCGCCA GGAAGATCAC GCGGAACGAC AGTGATAGAA
ACGCTGCACT ATCTCTGGAT TCTAACTCCG AACCAGATAG CGTATGGTAC AGAAAGACGA
ACATTTCTGT GCTATACTAT TAACAGTACT GACCAGTCAG TCGATCTCAG AGACAGGCGC
ATGATTCACT CTGCCGACAA ATGTTCCGAT CAGAAGAGCA CCCGCGAACG GATTCTCGAA
GCGGCGCTGG ACATTTTTTC GTCGAAAGGG TACCACGACG CGCGCCTGGA TGATATTGTC
GAAGTGGCGC ATATCTCGAA AGGGTCGATC TACTTCTACT TTCCAAACAA GGAGCGCCTC
TTTCTGGCGC TCGTCGATCA ATTCGCCGAC CTGATCGAGC GACGCGCCAC CGAAGCCATT
GAGCGCCAGC CGCGCGCCGG GATCGACCGG GTGCGCGCGG CGATCATGGC GGTGATCGAG
ACGTTCGGCA AGTATCGCCG TCCCGCCAAA ATCCTGCTGG TGCAGGCGGT TGGGTTGGGG
GCGCCTTTCG AGAAAAAGCG CCTGGAAGTC ACTGATCGCT TTGCGGCGTT GATTAAGCGC
CATCTCGACG AAGCAATCAC CGTGGGCGAA ATCCAGCCGA TCGACACGGC GGTGGTGGCG
CATGCCTGGA TGGGGGCAAT CTACAACCTG GTCATCCGTT GGGTGATGAC CGGCGATCCG
CCCGCGGAGC GTATTCCGCC CACGCTCGTA CCGTTACTGC TGCGCAGCGT TAATTATCCG
GTGGAAGAGA AACAGGGCAA CGCCGTATAA
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| Protein sequence | MPEQRNKKAP GRSRGTTVIE TLHYLWILTP NQIAYGTERR TFLCYTINST DQSVDLRDRR
MIHSADKCSD QKSTRERILE AALDIFSSKG YHDARLDDIV EVAHISKGSI YFYFPNKERL
FLALVDQFAD LIERRATEAI ERQPRAGIDR VRAAIMAVIE TFGKYRRPAK ILLVQAVGLG
APFEKKRLEV TDRFAALIKR HLDEAITVGE IQPIDTAVVA HAWMGAIYNL VIRWVMTGDP
PAERIPPTLV PLLLRSVNYP VEEKQGNAV
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