Gene Rcas_4208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4208 
Symbol 
ID5541719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5442584 
End bp5443717 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content62% 
IMG OID640896315 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_001434253 
Protein GI156744124 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.484579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.112955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC CTATCCGTGT CGTCGTGGTG GACGACTCAG CAATGATGCG GCGTTTCATC 
ACCGATATGC TTCAGCGTGA CCCGGCTATT CAGGTGGTCG GCGTCGCGTC GAATGGGCGC
GAGGCGATCG AGGTGGTGCA ACGGCTTCGC CCCGATGTTG TGACCATGGA TGTGCGCATG
CCCGTTATGG ACGGGGTGGC GACGACCGAA CACTTGATGG CGTATTGCCC AACGCCGATT
CTGGTGCTGA CCGCATCGCT CGCCAGTTAC GAGATGGATA TCACCTTCAA GATGCTTGGC
GCCGGTGCGC TCGAAGTGGT CGAGAAGCCG CATGGCAGTG ACGCACGCGC ACTCGAGCAC
GCTGCACGCG ATCTGGTGCG TCGGGTCAAG ATTCTATCGC GGGTCAAGGT GGTCACACAT
CTGCGCGGTC GGCGCCGCAC ACCCGGCAAT GACTCCACAG CGCCGCCTGC ATTCCCGGCT
CATCAAGCGC CCGCGCACGA CATACCACCG GCATCGTCGT CCAACGTCGT GTCGTCGACC
CACAGCGCAC CCGATGCCCC ACTCAGCCCG GTCATCGTCA TCGGCGCCAG CACAGGTGGT
CCGCGTGTCA TCCGCCAGAT TATTGCCGGT CTTCCGCGTG CATTCCCTGC TGCGGTGCTG
GTTGTGCAAC ACATCGCGGA AGGGTTTAGC GAAGGGATGG CGGAATGGTT GGCGAGCATC
GGCGCCCTAC CCGTGCACGT AGCCCGCGAA GGATCGCCCA TTCACGCTGG CGAAGTGCTG
ATAGCTCCAG ATCGGCGCAA TCTGTTGGTG ACGCACCACG GAACCGTTCA TCTGAGTGAT
GCACCGCTGC TGATTCAACG ACCATCGATC GATGTCACGA TGCAGGCGGT TGCCGAGGTG
TATGGCTCAC GCGCGGTTGG GGTGCTGCTG ACAGGGATGG GACGCGATGG AGCCTATGGG
ATGCGGGCGC TCTATCGTCG TCAGGCGTAT ACAATTGCGC AGGATGAGGC AAGTTGCGCC
ATTTTCGGCA TGCCGCGCGC AGCCATTCAA CTCGGAGCGG TGCGTGAGGT GTTGCCGCCG
GAAGCCATTG CGCCGCGGTT GGTGGAAGTG GTCGCCGGAT TAGTTGCAGG TTGA
 
Protein sequence
MTRPIRVVVV DDSAMMRRFI TDMLQRDPAI QVVGVASNGR EAIEVVQRLR PDVVTMDVRM 
PVMDGVATTE HLMAYCPTPI LVLTASLASY EMDITFKMLG AGALEVVEKP HGSDARALEH
AARDLVRRVK ILSRVKVVTH LRGRRRTPGN DSTAPPAFPA HQAPAHDIPP ASSSNVVSST
HSAPDAPLSP VIVIGASTGG PRVIRQIIAG LPRAFPAAVL VVQHIAEGFS EGMAEWLASI
GALPVHVARE GSPIHAGEVL IAPDRRNLLV THHGTVHLSD APLLIQRPSI DVTMQAVAEV
YGSRAVGVLL TGMGRDGAYG MRALYRRQAY TIAQDEASCA IFGMPRAAIQ LGAVREVLPP
EAIAPRLVEV VAGLVAG