Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4203 |
Symbol | |
ID | 5541714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5436772 |
End bp | 5437263 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640896310 |
Product | CheW protein |
Protein accession | YP_001434248 |
Protein GI | 156744119 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.017726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.169541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAATG ACGTTCCGTC GATACGCACA ATGGGCATAC AATCCGACTT CGCCGGACAA ACCGATCACA ATGTCCTGTT GATCCGTCTG GCTGACGAGA CCTATGCGTT GCCGTCAGCC CATGTGCGCG AAGTTGGACG ATACCGCGCG TTCACCCCCG TTCCCGGCGC TCCGCCGGCA ATCCCTGGGA TTATCAGTCA GCGCGGTGTC ATTCTGCCGG TCGTCGACCT TCGCCTCGTG CTCGGTATGC CATTTGCCGA GACGACCCGC TCGACACGCC TGGTCACGGT TGTCTATGAG GATACCGACA TGGCGTTGCT GGTGGACGCT GTGATCGATC TGGCGACTAT CCCGGCGGAA GCGTTCGGAC AACCGCCAAC CGGTCTTGAT CCTGCGCGCG CGCGTTTCCT GAGCGCCGTC GCGTTCTATG AGGACCAGAC TATTGCGCTG CTTGATGTGG TGGTGATCGT CGCCGCGCTG CGGGAGGCGT AG
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Protein sequence | MRNDVPSIRT MGIQSDFAGQ TDHNVLLIRL ADETYALPSA HVREVGRYRA FTPVPGAPPA IPGIISQRGV ILPVVDLRLV LGMPFAETTR STRLVTVVYE DTDMALLVDA VIDLATIPAE AFGQPPTGLD PARARFLSAV AFYEDQTIAL LDVVVIVAAL REA
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