Gene Rcas_4203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4203 
Symbol 
ID5541714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5436772 
End bp5437263 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID640896310 
ProductCheW protein 
Protein accessionYP_001434248 
Protein GI156744119 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.017726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.169541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAATG ACGTTCCGTC GATACGCACA ATGGGCATAC AATCCGACTT CGCCGGACAA 
ACCGATCACA ATGTCCTGTT GATCCGTCTG GCTGACGAGA CCTATGCGTT GCCGTCAGCC
CATGTGCGCG AAGTTGGACG ATACCGCGCG TTCACCCCCG TTCCCGGCGC TCCGCCGGCA
ATCCCTGGGA TTATCAGTCA GCGCGGTGTC ATTCTGCCGG TCGTCGACCT TCGCCTCGTG
CTCGGTATGC CATTTGCCGA GACGACCCGC TCGACACGCC TGGTCACGGT TGTCTATGAG
GATACCGACA TGGCGTTGCT GGTGGACGCT GTGATCGATC TGGCGACTAT CCCGGCGGAA
GCGTTCGGAC AACCGCCAAC CGGTCTTGAT CCTGCGCGCG CGCGTTTCCT GAGCGCCGTC
GCGTTCTATG AGGACCAGAC TATTGCGCTG CTTGATGTGG TGGTGATCGT CGCCGCGCTG
CGGGAGGCGT AG
 
Protein sequence
MRNDVPSIRT MGIQSDFAGQ TDHNVLLIRL ADETYALPSA HVREVGRYRA FTPVPGAPPA 
IPGIISQRGV ILPVVDLRLV LGMPFAETTR STRLVTVVYE DTDMALLVDA VIDLATIPAE
AFGQPPTGLD PARARFLSAV AFYEDQTIAL LDVVVIVAAL REA