Gene Rcas_4183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4183 
Symbol 
ID5541694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5413189 
End bp5414301 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content52% 
IMG OID640896293 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_001434231 
Protein GI156744102 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.712653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000333681 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGCAG CCACAAAGCC GCAAGCATTC GTTACACCCG ATCAGTGGCG ATCAACGATT 
GTCGAGACTC ATCACCGCGC CAGGGTTGAC GCCTATCTGT GCGACACACG GCTGCAACCG
CTCCTGCTGC TCGGCGACGC GCAGACCGTT TTGGAGCAAT TGCCAGAAGC GAGTATCGAT
ATGGTGATGA CCTCTCCTCC GTACTGGGGG AAGCGTGAAT ACGACGATGG CGGTATTGGG
ATGGAGGATG ACCATCGTGA GTACATCCGT CATCTCACAC AGATATGTTC TCTCATCAAG
CGGGTGCTGA AACCTGAAGG ATCATTCTGG CTCAACCTTG GCGATACCTA TCATCATATG
CACCTGCTCG GCATTCCCTG GCGTGTGGCG CTCGCACTGA CCGATCATCA GGGATGGATC
TTGCGCAATA GTGTGATCTG GAATAAGGTC AAAAGTGGTA TGGATACCGC AAAGAACCGA
TTAGGAAATG TTCATGAATA TCTGTTTCAT TTTGTGAAAC AACCGAAATA CTACTACAAC
GTCGACGCAA TTCGCTCAAA ACCACGGCAA TCCCGAGTTG TGAACGGCTC GGTCATATCG
GCGACAGGAG TTTCTGGGGT GCGTTATCGC CGTCAGATCG AACTTTCAAC CGCTCTTTCT
AACGAAGAGA AGCAGGAAGC GCTCAGGGAA TTGAACAAAA TGCTGGAAGA TGTCGCTGCC
GGTAAAATAT CCGATTTCCG GATGATCATT CGCGGACAGC AGAGGGCTAC CCATTCCGAT
CGCGAGCGTG TGTCGGGACG AGCGCGTGAG CTGAAGGAGA AAGGATTCTA TTTTTTACGC
TACCATCCTC ACGGCAGCAA GCCCGGGGAT GTGTGGGACA TTCTCCCTGA GGATACGCAA
CGGCGAGATG TGCATTTTGC ACCGTATCCT GTCGATCTCT GTCGAATCCC TATCCTGTCC
ACCTGTCCAG AATATGGCGT GGTTCTTGAC CCGTTTTGCG GAACAGGAAC CACACTCCTG
GCGGCGCGTG ATCTGGGGCG GAGATCGATA GGTATTGATA TTTCGCAGAG CTATCTCGAA
ATAGCATTGC AACGGTGTCA AACATTGTTA TGA
 
Protein sequence
MDAATKPQAF VTPDQWRSTI VETHHRARVD AYLCDTRLQP LLLLGDAQTV LEQLPEASID 
MVMTSPPYWG KREYDDGGIG MEDDHREYIR HLTQICSLIK RVLKPEGSFW LNLGDTYHHM
HLLGIPWRVA LALTDHQGWI LRNSVIWNKV KSGMDTAKNR LGNVHEYLFH FVKQPKYYYN
VDAIRSKPRQ SRVVNGSVIS ATGVSGVRYR RQIELSTALS NEEKQEALRE LNKMLEDVAA
GKISDFRMII RGQQRATHSD RERVSGRARE LKEKGFYFLR YHPHGSKPGD VWDILPEDTQ
RRDVHFAPYP VDLCRIPILS TCPEYGVVLD PFCGTGTTLL AARDLGRRSI GIDISQSYLE
IALQRCQTLL