Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4183 |
Symbol | |
ID | 5541694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5413189 |
End bp | 5414301 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640896293 |
Product | DNA methylase N-4/N-6 domain-containing protein |
Protein accession | YP_001434231 |
Protein GI | 156744102 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0863] DNA modification methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.712653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000333681 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGCAG CCACAAAGCC GCAAGCATTC GTTACACCCG ATCAGTGGCG ATCAACGATT GTCGAGACTC ATCACCGCGC CAGGGTTGAC GCCTATCTGT GCGACACACG GCTGCAACCG CTCCTGCTGC TCGGCGACGC GCAGACCGTT TTGGAGCAAT TGCCAGAAGC GAGTATCGAT ATGGTGATGA CCTCTCCTCC GTACTGGGGG AAGCGTGAAT ACGACGATGG CGGTATTGGG ATGGAGGATG ACCATCGTGA GTACATCCGT CATCTCACAC AGATATGTTC TCTCATCAAG CGGGTGCTGA AACCTGAAGG ATCATTCTGG CTCAACCTTG GCGATACCTA TCATCATATG CACCTGCTCG GCATTCCCTG GCGTGTGGCG CTCGCACTGA CCGATCATCA GGGATGGATC TTGCGCAATA GTGTGATCTG GAATAAGGTC AAAAGTGGTA TGGATACCGC AAAGAACCGA TTAGGAAATG TTCATGAATA TCTGTTTCAT TTTGTGAAAC AACCGAAATA CTACTACAAC GTCGACGCAA TTCGCTCAAA ACCACGGCAA TCCCGAGTTG TGAACGGCTC GGTCATATCG GCGACAGGAG TTTCTGGGGT GCGTTATCGC CGTCAGATCG AACTTTCAAC CGCTCTTTCT AACGAAGAGA AGCAGGAAGC GCTCAGGGAA TTGAACAAAA TGCTGGAAGA TGTCGCTGCC GGTAAAATAT CCGATTTCCG GATGATCATT CGCGGACAGC AGAGGGCTAC CCATTCCGAT CGCGAGCGTG TGTCGGGACG AGCGCGTGAG CTGAAGGAGA AAGGATTCTA TTTTTTACGC TACCATCCTC ACGGCAGCAA GCCCGGGGAT GTGTGGGACA TTCTCCCTGA GGATACGCAA CGGCGAGATG TGCATTTTGC ACCGTATCCT GTCGATCTCT GTCGAATCCC TATCCTGTCC ACCTGTCCAG AATATGGCGT GGTTCTTGAC CCGTTTTGCG GAACAGGAAC CACACTCCTG GCGGCGCGTG ATCTGGGGCG GAGATCGATA GGTATTGATA TTTCGCAGAG CTATCTCGAA ATAGCATTGC AACGGTGTCA AACATTGTTA TGA
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Protein sequence | MDAATKPQAF VTPDQWRSTI VETHHRARVD AYLCDTRLQP LLLLGDAQTV LEQLPEASID MVMTSPPYWG KREYDDGGIG MEDDHREYIR HLTQICSLIK RVLKPEGSFW LNLGDTYHHM HLLGIPWRVA LALTDHQGWI LRNSVIWNKV KSGMDTAKNR LGNVHEYLFH FVKQPKYYYN VDAIRSKPRQ SRVVNGSVIS ATGVSGVRYR RQIELSTALS NEEKQEALRE LNKMLEDVAA GKISDFRMII RGQQRATHSD RERVSGRARE LKEKGFYFLR YHPHGSKPGD VWDILPEDTQ RRDVHFAPYP VDLCRIPILS TCPEYGVVLD PFCGTGTTLL AARDLGRRSI GIDISQSYLE IALQRCQTLL
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