| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4159 |
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| Symbol | |
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| ID | 5541670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5382198 |
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| End bp | 5383595 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896270 |
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| Product | TadE family protein |
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| Protein accession | YP_001434208 |
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| Protein GI | 156744079 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.442467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCA CCGGGACAAA TCGCAGGCGA CGCGCGCAGA GCGTGGTGGA GTTTTCAATC
ATTCTGCCAC TCCTCCTGTT ACTCATTCTG GGCGTTATTG AACTCGGCTA CATGCTCTTC
GTCTACGTCC AGTTGCAGAA TGCCGCGCGC GAAGGCGCTC GCAGCGCTGC GGTTCGTCCC
TGTCCAACTC AGCAAGACAT CAACCGAATC ATTGCCGACA CTCGTGAGCG CATCGCGGCA
TTTGTCGATA CCAATACCAT CACGCCCAGC ATCACCTGGA GCGCTGACGA AAACGGCAAC
CTGCGCTGGC GCTATACCGA TCCGGTAACC GTGTCGCTTA ACTACACGCT TGAGCCGCTC
GACCCAATCG TTGGAGCGTT CATTCCGCAG ATTGAAATCA ATGCCATCGC ATCGCGATCC
ATCACGACCG ACTGCGACAT CGCCTCAGTG GTGCGCGCGA CGCCAACGCC ATCGAATACA
CCGACCCACA CGCCAACACC ATCGAATACA CCCACACCCA GCGCGACGCC AACACCATCG
CACACACCCA CACCCAGCGC GACGCCAACA CCATCGCACA CACCCACACC CAGCGCGACG
CCAACACCAT CGCACACACC CACACCCAGC GCGACGCCAA CACCATCGCA CACACCCACA
CCCAGCGCGA CGCCAACACC ATCGCACACA CCCCGCACCA ACACACCGAC CAATACACGC
ACGCCGACCA ATATACGCAC GCTGACACCG ACTGCCTGTC CGGTGACGAT CTGTACGGCA
ACACCGACAC GCACGCCGAC CAATACACGC ACGCCGACCA ATACGCGCAC CAACACGCCG
ACACCATCGC GCACACCGAC GCGCACCAAC ACGCCGACGC ACACCAACAC GCCAACGCGC
ACTAACACGC CGATGCCGAC CAATACGCCG ACGCCATCGC GTACACCGAC GCGCACCAAC
ACGCCAACGC GCACCAATAC GCCAACGCCC ACCAACACAC CAACGCGCAC CAATACGCCG
ACCAATACGC CGACGCCATC GCACACGCCA ACGCCACAGG CGATCACGTA TTCGGTGGTG
GGGTCTAAGC GGATCGATCC AAATGCACCA CCCGGCGAAC TGTCCGACAT GCGCATTCGG
ATCACGGTGC GCAACAATCT GGGGCAACCC GTGCCAGGCG TGAGTTTCAG CATAGTGGTA
TCCGGCGCAT CGCCAACCAC GACGTGGACC GGCGTCAGCG ACAGTAATGG CGTGATCATC
ATCTGCATCG CCGACACCTA TCGGGCGCGC GACAACCTGG ACGTGACCAC CGACGTCACC
AGTCCCGAAT ACCCCGATCC AGGGCTGGAC GGTCGAAGGA TCACGGTTCA GAACGGAGCA
GTGACGTGTA ATCCGTGA
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| Protein sequence | MPATGTNRRR RAQSVVEFSI ILPLLLLLIL GVIELGYMLF VYVQLQNAAR EGARSAAVRP
CPTQQDINRI IADTRERIAA FVDTNTITPS ITWSADENGN LRWRYTDPVT VSLNYTLEPL
DPIVGAFIPQ IEINAIASRS ITTDCDIASV VRATPTPSNT PTHTPTPSNT PTPSATPTPS
HTPTPSATPT PSHTPTPSAT PTPSHTPTPS ATPTPSHTPT PSATPTPSHT PRTNTPTNTR
TPTNIRTLTP TACPVTICTA TPTRTPTNTR TPTNTRTNTP TPSRTPTRTN TPTHTNTPTR
TNTPMPTNTP TPSRTPTRTN TPTRTNTPTP TNTPTRTNTP TNTPTPSHTP TPQAITYSVV
GSKRIDPNAP PGELSDMRIR ITVRNNLGQP VPGVSFSIVV SGASPTTTWT GVSDSNGVII
ICIADTYRAR DNLDVTTDVT SPEYPDPGLD GRRITVQNGA VTCNP
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