| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4154 |
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| Symbol | |
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| ID | 5541665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5376054 |
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| End bp | 5377313 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896265 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001434203 |
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| Protein GI | 156744074 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.268722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGTCA ACACTCGCAT CCATGTCGTC ATCGTCACCG CTCCAGAACG TCTCGATCAG
GAATGGATCG GTCGCCTGGC AGCCGAACCG GACATCGCGC GCGTCGATCG GGTTGCAGCG
ACAACTGCCG GCTTCGAACT GATCCAGCAA ACGCGCCCAG ATCTTGTGAT CGTGGATCGC
GACACCGATC AGGCGGAACA ACTGATCCGT CAGGTCTTCA CCACCCTGCC TGCAACGATC
TGCATCGCAG TGACGGCGCG GGTCGATACC GCAACGCTGC GCCGACTCGT GGCGGTTGGC
GCGCGCGATG TGCTCGGACG TCCAATCCAG TATGCGGAAC TGAGCCAAAG TATTCGCACG
CTGCTCGACA CCGAAACCGA CCGTCGCGCG CGCGCCCTGG TGACGCTCAA TGGCAATCGC
CCGCAGATGC GCGGCAAACT CGTGGTCGTC ATCTCACCCA AAGGCGGATC GGGCACGACG
ACGATCGCCG CCAACCTGGC GGTCGGCTTG CGTCAGGTCA GCGCCAGCCG CGTGTTGCTC
GCCGATTGCT GCCTTCAGTT TGGCGATGCC GGCGTACACC TGAACCTCTG GTCGAAACAT
ACGCTGGTTG ATTTCATCGA TCACCTTGAC GATATCGACG ACGCCATGAT CGGCTCGGTC
GTCCAGCAGC ACGAATCCGG CACACATGTG CTGCTCGCAC CCAATACACC CGATGCCGCT
GGCGACATCA GCGGCGAACA GATCAGCCGC CTGATTGATG CGCTGCTCGA ACGGTATAGT
TACGTTGTCG CCGATACCTG GTCATTCCTC GACGATATTA CCGCAACCCT GGTCAGCAAA
GCCAACGAGA CGCTGGTTGT GACCACGCCG GAAGTGCCGT CGCTCAAGAA TGTCAAGCGC
TTTCTAGAAT TCATTCAGCG CGAAGGACTG ACACACGGCA GGATCACGCT GGTGATCAAC
CGCTTTCCCA GCGTCGATGG CATTGCGCTT GATGATGTCA AACAACATTT GCGCCATCCG
ATCGGCGCCA ACATTCCGAG CGAAGGACGC CTGGTAACGC ACAGCGTCAA CCGGGGCATT
CCGATTGTGA TATCGCACCC GGAAAGTTGG GTGGGGCAGA GCCTGCTCAA ACTGGCGGCG
CACATTGCTG GCGAGCAGGT TGCCACGCTC TCACTCGCGC CGTCCCGGTC ACGCGCGAAA
GGATTGGCGG GACTGATCGA ACGGCGCGGT TTCTTTGGTT TTGCGCGACG TGAAACGTAG
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| Protein sequence | MAVNTRIHVV IVTAPERLDQ EWIGRLAAEP DIARVDRVAA TTAGFELIQQ TRPDLVIVDR
DTDQAEQLIR QVFTTLPATI CIAVTARVDT ATLRRLVAVG ARDVLGRPIQ YAELSQSIRT
LLDTETDRRA RALVTLNGNR PQMRGKLVVV ISPKGGSGTT TIAANLAVGL RQVSASRVLL
ADCCLQFGDA GVHLNLWSKH TLVDFIDHLD DIDDAMIGSV VQQHESGTHV LLAPNTPDAA
GDISGEQISR LIDALLERYS YVVADTWSFL DDITATLVSK ANETLVVTTP EVPSLKNVKR
FLEFIQREGL THGRITLVIN RFPSVDGIAL DDVKQHLRHP IGANIPSEGR LVTHSVNRGI
PIVISHPESW VGQSLLKLAA HIAGEQVATL SLAPSRSRAK GLAGLIERRG FFGFARRET
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