| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4153 |
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| Symbol | |
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| ID | 5541664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5375062 |
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| End bp | 5375865 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896264 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001434202 |
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| Protein GI | 156744073 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.250853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCAA GGAGGCTGGC AGTGACACGT CGCAGCGGTT GGATCCTGCT CACTCTGGGA
GCGATTCTTG CCATTGGCGC CGGAGCGCTG GTCTATCTCG TGCTTCAGCA GCAATCGGTC
GCTGCTGCGG AACAGGCGCG ACGCGAGGTG CTGGCGCAGC AAGCGCCACA GGTTCCGGTG
ATCAAATTGC CGGTAGCCGC CCGGCCACTC GCTCCCGGCA ACACCATTGG ACCCGACGAC
ATCCTGCTCA AAGATTATCC GGTCAATCTC GTTCCCGTCA ATGCACTGAC CGATACGACC
CAGATCGAAA ATCGCATCCT GGCGCGCACG GTTGGTCAGG GCGATCCATT CCAGAAGAGC
ATGTTCGTCG GCGAACGCGG CGAGTCGATC AGCCAGGAAA TTCCGCCTGG GTATGTGCTC
TTCGCCTTCC CTATCGTTGA TCTCCTTGGA CAGAGCAATC TGATCGCGGA TGGCGACCGC
ATCGACCTGT ATCTGACGCT GAACACGCCG CTCAACGCTG CGGCGACGCC GGCGCCCGAC
CAACCGACGA CACCGACGAC CGCGCTAACG CTTCAGAATG TGCAGGTGCT CAAAGTGCTG
CGCTCAGAAC CGCGCGAAGG CGCGACCAAA ACGCCGGCAA CTGCGCTGCT CTGCGCGATG
CGTCCCGAAG ACGCAATTAT TCTGAAGCAT ATCAAGGATA CTGGTGGAAC CATCGATTTT
GCGCTGCGTT CGCCGCTCGA TACCGAGCCG TTTACCACTG AGCCGCTCGA CCTGCCGGAA
CTGATTCAGC GCTACATGCG GTGA
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| Protein sequence | MESRRLAVTR RSGWILLTLG AILAIGAGAL VYLVLQQQSV AAAEQARREV LAQQAPQVPV
IKLPVAARPL APGNTIGPDD ILLKDYPVNL VPVNALTDTT QIENRILART VGQGDPFQKS
MFVGERGESI SQEIPPGYVL FAFPIVDLLG QSNLIADGDR IDLYLTLNTP LNAAATPAPD
QPTTPTTALT LQNVQVLKVL RSEPREGATK TPATALLCAM RPEDAIILKH IKDTGGTIDF
ALRSPLDTEP FTTEPLDLPE LIQRYMR
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