| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4151 |
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| Symbol | |
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| ID | 5541662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5372848 |
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| End bp | 5374086 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896262 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001434200 |
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| Protein GI | 156744071 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.111362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTT CGGATGCGAG CGGAGCCATG CCTATTCTTG CTTCAACACA CGACGATACG
CCAGAAACTA TCGCCTGTCA GAGCGTGCTC GATGCACTAA ACGCACAGAT TGCCGTGCTT
GATCGCAACG GCGTGATTAT CGCCGCGAAT CGGGCGTGGT TTCGCCTGAT TGCGGCGCAG
AGCGGCGATC GATTGTTTCG GATTGGCGCA CACTACCGTG ACGACTGGAC ATGTGAACAG
AGCGTGTTTG CCGATGTGGT CCCGGATGCG CCAGCCGGGA TCGATGCCGT GCTGCGGGGT
GAGCGGTCTT CCTTCATGCA GGAGTACAGT CGTCCGACGG ATGACGGCGA GCGCTGGTTT
CGTCTCGAAG CGTTGCCGCT CAGGGAAGGC GGCGTGGCGC TCGTCAATAC CGACATCACT
GCACAGCCGG CCGTCGAGGC GCTGGTCCGC CTGCGCGAGC AGCATCAACG TCTTCAGGAT
CGCGTGCGGC GGCGGCGGCG GCTTGCTCAT GCGCCACGCC AGTCGTTGCG CTTGTTGATC
GAACAGACGA CCCGCCTGGC GCGCGCCAAT ACCGAATTGC AACAGTTTAC CTCGATTGTG
TCGCACGAAC TGCGTGAACC GCTGCGGATG GTCGTCAGTT TTCTCGATCT GCTCCGACGA
CGCTATGGCG AACAGCTCGA TGATCGCGCC AACGAGTACA TTGCCTACGC GCACGATGGC
GCCACGCGGA TGCAAGCGAT CATCGACAAA CTGCTGGCAT ACGCTCGTCT CGATCAGCAT
CGGTCGGTTG TGCGCCCCGT CGATTGCAAC GATGTTCTGG CGCGCGCCAT CGGTATGTTG
CAGGTGGCGA TTGCCGAAAG CCGGGCAGAG ATCACGTTCG ATCCGCTGCC TGTCGTTTTT
GGCGATGATG TCGAACTTGG ACTGGTGTTT CGCAATCTGA TCAGCAATGC GATCAAGTTT
CGCGGTGATG AGCGACCGCG CATTCATATC GGTGCGCAAC GCCGGATGAA TGAGTGGCTC
TTTACTGTGC GCGATCATGG TATCGGCATT CCAGCCGAGG ATGTGGAACG CATCTTCGAT
ATATTCGTTC GTGGGCAGAG TCGGCGCCAG TATCCGGGAA GCGGGATCGG GTTGGCGATC
TGCCGGAAGG TGATCACCCG GCATGGCGGT CGGATCTGGG TCGAGCGTCC GGTTGATGGC
GGGTCGCTGT TTTGCTTTAC GTTACCGGCG CTTCCATAG
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| Protein sequence | MQTSDASGAM PILASTHDDT PETIACQSVL DALNAQIAVL DRNGVIIAAN RAWFRLIAAQ
SGDRLFRIGA HYRDDWTCEQ SVFADVVPDA PAGIDAVLRG ERSSFMQEYS RPTDDGERWF
RLEALPLREG GVALVNTDIT AQPAVEALVR LREQHQRLQD RVRRRRRLAH APRQSLRLLI
EQTTRLARAN TELQQFTSIV SHELREPLRM VVSFLDLLRR RYGEQLDDRA NEYIAYAHDG
ATRMQAIIDK LLAYARLDQH RSVVRPVDCN DVLARAIGML QVAIAESRAE ITFDPLPVVF
GDDVELGLVF RNLISNAIKF RGDERPRIHI GAQRRMNEWL FTVRDHGIGI PAEDVERIFD
IFVRGQSRRQ YPGSGIGLAI CRKVITRHGG RIWVERPVDG GSLFCFTLPA LP
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