| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4137 |
|---|
| Symbol | |
|---|
| ID | 5541648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5355178 |
|---|
| End bp | 5356473 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640896248 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001434186 |
|---|
| Protein GI | 156744057 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000953773 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCG GCGTTGACAT TTCGCTCCTG CGAATTGCTC AGGCAGGCGT GCTGACCTAT
CATCGGTCGC TGCTCGACCA TCTGGTGCGA GCCGGGCGTG ATTGCCATTT TACGCTGATC
GATGTGCTGC CGCTCAACCC TGGCCGTTCG ATGCTGTGGC TGGCAGCCCT CGACTCGCCG
AATGTGCGGG TCGTGCGTTG CCCCGGCGTT CGGCGTGGCT ACCTGAGCGC GCTTCCTGCG
TTTCGTGATG GAGTGGCGCA TCCGATTGCG GCGCGGATCG ACCGCATCCT CGATCCAATC
TGGTCGCAAC TGGCGGTCGC CGAGATGGGG CTGGAACTCA GGGGCGCCAC GAGGTTCGTT
GAGGTCTTTC ATGCTTCCGA TCAATTGCCT TATGCACCGC CTGGCGCTGC AACCGTGCTG
ACCATTCACG ATCTGACCAC CCGGCGCTTC CCCGATATGC ATGTGGCGGA GAACGTTGCG
TTGCATGCAG CCAAGGAGCG ATTTGCCCGC GACCGCGCCG ACCGGATTAT TGCCGTGTCG
GAAGCGACCC GCCGTGATAT TGTGTGCGAA CTGGGCATTC CGCCTGAGCG GATCAGTGTG
GTGTATGAAG CCGCAGATGT GCGCTTTCGT CCACGCGCGC CGGATGAAAC GTGTTCGGTT
CTGGCGCGAT ACGATATAGC GCATGGCGCG TATGTGCTGA GTGTTGGCAC GCTCGAGCCG
CGCAAGAACT ACATCCGTTT GATCGAAGCG TATGCCGTGT TGTGTGCGCG GTATGCCGCA
GATGCGCGTC GTTTGCCGCC GTTGATTATT GCCGGCGGCT ACGGCTGGAA GCACGACGCG
ATCCTCGCCG CGCCGGAACG CGCCGGAGTT GCCGGACAGG TCCGATTTAT CGGGCGCATT
CCCGATGACG ACCTGCCTGC ACTGGTTGCC GGGGCGCGCC TGTTTGTGTA TCCTTCACTG
TACGAAGGGT TTGGTCTTCC GCCGCTGGAG GCGCTTGCTT CAGGAACGCC GGTGGTGGTG
GCAAACACCT CATCGCTGCC GGAGGTGGTT GGCGATGCCG GATTGTACTG CGATCCGTAT
CAGGTGAGCG ATATTGCGCG CCAGATCGCT GCACTCCTGG ACAGCGAGGA CCTGGCGTTG
CGGTTACGGC ACGCTGGAAT TGAACGCGCA AAGCAGTTCT CGTGGGAGCG CGCTGCCCGT
GAAACGCTTG CAGTCTATGC GCAGGCGCGC GCTGAACGCT GTGCGAGGCG ACGATGGCAA
TTTACTGGGT TCATTCCGAC AGCGATGACG CGCTGA
|
|---|
| Protein sequence | MHIGVDISLL RIAQAGVLTY HRSLLDHLVR AGRDCHFTLI DVLPLNPGRS MLWLAALDSP
NVRVVRCPGV RRGYLSALPA FRDGVAHPIA ARIDRILDPI WSQLAVAEMG LELRGATRFV
EVFHASDQLP YAPPGAATVL TIHDLTTRRF PDMHVAENVA LHAAKERFAR DRADRIIAVS
EATRRDIVCE LGIPPERISV VYEAADVRFR PRAPDETCSV LARYDIAHGA YVLSVGTLEP
RKNYIRLIEA YAVLCARYAA DARRLPPLII AGGYGWKHDA ILAAPERAGV AGQVRFIGRI
PDDDLPALVA GARLFVYPSL YEGFGLPPLE ALASGTPVVV ANTSSLPEVV GDAGLYCDPY
QVSDIARQIA ALLDSEDLAL RLRHAGIERA KQFSWERAAR ETLAVYAQAR AERCARRRWQ
FTGFIPTAMT R
|
|---|
| |