| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4128 |
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| Symbol | |
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| ID | 5541639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5342798 |
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| End bp | 5343202 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640896240 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001434178 |
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| Protein GI | 156744049 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000124069 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAAAAG ACCCGAACAT TGAGGGCGCG CGCTGGCTCC AGCAAGCCCA GATCGATCTC
CACTGGTGTC GCCATCTGCG TGATCAGGGC GCCTGGTATC TGGCATGCTT TCTTGCGCAG
CAGGTGGCCG AAAAGGCGCT GAAGGCATTC CTCTACGCAC AAGGAGAAGA GTTGGTGATT
GGTCATTCGG TGCGTCAACT ATGCGCTCGC GCCGGAGTCT ACGATCCCAA CTTTCAACAA
ACGCTGTCCC GTTGGGGAAT TCTCGACAGT TATTACATTC CTACGCGCTA TCCCAATGGT
CTTCCAGGCG ACATTCCGGC TAACGTCTAC AACCAGGAAA TCGCCGACAG TGCGGTGCAA
CTCGCAGCAG AAGTCGTTTC GGCAGTAGAG ACGCACTTCG CCTGA
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| Protein sequence | MRKDPNIEGA RWLQQAQIDL HWCRHLRDQG AWYLACFLAQ QVAEKALKAF LYAQGEELVI
GHSVRQLCAR AGVYDPNFQQ TLSRWGILDS YYIPTRYPNG LPGDIPANVY NQEIADSAVQ
LAAEVVSAVE THFA
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