| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4118 |
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| Symbol | |
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| ID | 5541629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5331455 |
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| End bp | 5332831 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640896230 |
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| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
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| Protein accession | YP_001434168 |
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| Protein GI | 156744039 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00476179 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCTAT TGCAGCATCC GCTTCTCGAA ACGCTGGCGC CGCTCTTCGA TGCGCTTGCG
CGGGCCGGCG GACGTCCGCT GCTCGTCGGT GGAGCGGTGC GCGATCTGCT GCTTGGGTTG
CCGCCAACAG ACATCGATGT GGAAGTCTAT GGCATTGATG GACAGCACCT CGCTGCTGCA
CTTGCGCCGT TTGGCCGGGT CGATGCCGTT GGGCGCTCGT TCGGCGTGCT GAAATTGCGG
CTCGATGGGT ACAACGTGGA TGTGGCGCTG CCGGCGCGTT ATCGTCCGGC TGCCGCCGGG
GAGCCTGGCG CGTTAGCCGA GTATGATCCG TCTCTGACGC CGCGCGAGGC GCTGGCGCGC
CGTGATTTTA CGATCAATGC GCTGGCGCTG ACGCCATCCG GCGATCTCGT CGATTATTTT
GGCGGTCGCG CCGACCTCGA AGCGCGGCGG CTGTGCCACA CATCCGAAGC GTTCGGCGAC
GATCCGCTAC GTGTGTTGCG CGCGATGCAG TTTGCGGCAC GCTTCAACAT GCGCCTGGCG
CCAGACACGG CTGCGCTCTG TCGCACCCTG CTTCCCGCAT CCGCCGGTCT TCCGCTCGAC
CGTATCTGGC GTGAATGGCA CAAATGGGCA ACTCTTGGCG CCCATCCGTC TGCCGGACTG
CGCGCCCTCG ACGAATCGGG ATGGCTGGCG CTCTACCCTG AACTTGCCGC ATTACAGGGA
TGCCCGCAAC ATCCGCACTT TCATCCCGAA GGGGATGTGT GGCTGCATAC ACTCTACGTC
TGCGACGCAG CAGTGCGTAT TGCCGAACGC GATGCGCTGG ATGCGCGCGA CCGCGCGGTG
CTGATCTTTG CGGCGCTGTG TCACGACCTG GGCAAGCCTC CTACAACCAT AGTCGAGGAA
GACGGCATTC CGCGCAGTCC TGGTCACGCA ACCGCAGGTG TACCGTTGAC CCGGGCGTTT
CTTGCGCGTA TCGGATCACC GCACTGGCTC GAACCTCTGG TGACGCCGCT AGTGCGTGAG
CACCTGGCGC ATCTCCATAC TCCGCCGACA CCGCGTGTGG TGCGTCGCCT GGCACATCGT
CTCACGCCGG CAACCCTGGT GCAGTGGGAA CGATTGGTCG AAGCCGACGC CTCCGGGCGG
CCACCACTCC CGCCAGAGCG ACCGGCGGCA GCACATCTGG CGCTTGCCGA GGCGGAGGGC
GCAGCCAAAA ACCGCCCCGC GCCACTGGTG CGCGGGCGTG ACCTGATCGC CGCGGGGGTC
GAGCCAGGTC CGCGCCTGGG AGCGCTGCTG CGGCGCGCCT ACGAAGCGCA ACTCGATGGC
GCTTTCCGCA CCGTGGAGGA GGGAATAGCG TGGGTGTTGC ACACGAACGA GCATTGA
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| Protein sequence | MSLLQHPLLE TLAPLFDALA RAGGRPLLVG GAVRDLLLGL PPTDIDVEVY GIDGQHLAAA
LAPFGRVDAV GRSFGVLKLR LDGYNVDVAL PARYRPAAAG EPGALAEYDP SLTPREALAR
RDFTINALAL TPSGDLVDYF GGRADLEARR LCHTSEAFGD DPLRVLRAMQ FAARFNMRLA
PDTAALCRTL LPASAGLPLD RIWREWHKWA TLGAHPSAGL RALDESGWLA LYPELAALQG
CPQHPHFHPE GDVWLHTLYV CDAAVRIAER DALDARDRAV LIFAALCHDL GKPPTTIVEE
DGIPRSPGHA TAGVPLTRAF LARIGSPHWL EPLVTPLVRE HLAHLHTPPT PRVVRRLAHR
LTPATLVQWE RLVEADASGR PPLPPERPAA AHLALAEAEG AAKNRPAPLV RGRDLIAAGV
EPGPRLGALL RRAYEAQLDG AFRTVEEGIA WVLHTNEH
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