Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4113 |
Symbol | glpC |
ID | 5541624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5325657 |
End bp | 5326907 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896225 |
Product | sn-glycerol-3-phosphate dehydrogenase subunit C |
Protein accession | YP_001434163 |
Protein GI | 156744034 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.774885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0186832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATTC CAGAGGATCA CATCGAACAA TCGCTTGAAG CGTCGCTCGA CCATTGCATC AAGTGCAACA TTTGCACGGC GGCGTGTCCG GTCAGTGCCG TTACCGATTT GTTTCCCGGA CCCAAATATG TCGGTCCGCA GGCGCAGCGT TTCCGGCACG CGCGTCAACC GTCGCCCGAT GAGTCGGTAG ATTACTGTTC AGGATGTCGC GTGTGCAATG AGGTCTGCCC GACCGGCGTG CGGATCGCCG AACTGAATGC GCGGGCGCGG GCGCGTCTGG TGGCAGAGCG CGGCATCCCG CTGCGCAATC GCCTGATCAG TCGCTCTGGT CTGGTCGGTC GTTTGGGGGC GGGACCGCAC GCGCCGATCG CCAATGCGCT GCTCGGTTCC AAACCGCTGC GCATGGTCAT CGAGCGCACA CTGGGCATTG CGCGGGAGGC GCCATTGCCG GCGTTCAGCC GGTACACCTT TCGGTCGTGG TTCCGGCGCC GACGCGCGCC GCAGATCGAC GCCGGAACAC CGAAACGCCA GGTGGTCTAC TTCCATGGAT GCTCGGCAAA CTACTATGAG CCGTGGATCG GCAAAGCAGT CGTCGCGGTG CTCGAACACA ACGGTTTCGA GGTGCTGCTT CCTCGCCAGC GCTGCTGCGG TCTGCCGCTG CTCTCGAATG GCGACTTTGC GGCTGCACGT CGCGCGCACG AAGAGAACGT CGCGTTCCTG GCGCCGTATG CGCTGCGCAC CATCCCAATT GTTGGCGCCA GCACCAGTTG TACACTGACG CTCAAAGAAG AAGCGCCGGA ATTGCTCGGC ATGCAGAGCG ATACGGTGCG CGCAGTTGCA CAGCAGACAT ATGACATCTT TGAGTTTCTG CGTCTGCTCC ACATGCGCGG CGAGTTGCGC ACCGACTTTC GCCCGATTGA GCGCACGCTG CCGTACCATC CGCCATGCCA GTTGCGCGCG CATCGCATCG GTCGCCCCGC GCTCGACGTG CTGGAACTCG TCCCCGGACT GCGCCTGATC GAAACGCACG CCGGTTGCTG CGGCATCGCC GGAACATATG GATTGAAAGT CGAGAAGTAT CGGATCAGCA TGGATGTCGG GGCGCCATTG TTCGAGACCG TGCGACGCTC CGGCGCCGAT ATGGCGCTGT GTGATTCAGA GACATGCCGC TGGCAGATCA GCCATGGCGC TGGCGTGGTT GCGCGCCATC CGATTGAGAT TCTTGCCGAA GCATACGGAC TTGTGACGTG A
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Protein sequence | MIIPEDHIEQ SLEASLDHCI KCNICTAACP VSAVTDLFPG PKYVGPQAQR FRHARQPSPD ESVDYCSGCR VCNEVCPTGV RIAELNARAR ARLVAERGIP LRNRLISRSG LVGRLGAGPH APIANALLGS KPLRMVIERT LGIAREAPLP AFSRYTFRSW FRRRRAPQID AGTPKRQVVY FHGCSANYYE PWIGKAVVAV LEHNGFEVLL PRQRCCGLPL LSNGDFAAAR RAHEENVAFL APYALRTIPI VGASTSCTLT LKEEAPELLG MQSDTVRAVA QQTYDIFEFL RLLHMRGELR TDFRPIERTL PYHPPCQLRA HRIGRPALDV LELVPGLRLI ETHAGCCGIA GTYGLKVEKY RISMDVGAPL FETVRRSGAD MALCDSETCR WQISHGAGVV ARHPIEILAE AYGLVT
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