| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4112 |
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| Symbol | |
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| ID | 5541623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5324413 |
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| End bp | 5325657 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896224 |
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| Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
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| Protein accession | YP_001434162 |
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| Protein GI | 156744033 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.889687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0200545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAA CGATCGTGAT CGGCGCAGGG TTGAGTGGAT TGATGGGCGC GCTGGCGCTG
GCAGAAGCCG GACTGCGGCC GCTGGTGCTG GCGAAGGGGC AGGGAGCGAC CCACTGGACC
GCTGGCACGG TTGATATCTG GGGCGGCGAT GAACGTTCGC CGCGCGAGGC GCTTCAGGAG
ATCGGCGCAT TACACCCGCA TCACCCATAC GCGCTCATCG GCGCGCACGC CGTGGAGGAA
GCCATTGTGC GCTTTCGCGC ACTGACCGAG GCGGCGCGGT ATCCGTATGT CGGCGGGCTG
GATCGGAATA TTTTGTTGCC GACGTCGGCA GGTGCGCTGC GGCCGGCTGC GCTCCTGCCG
GTGACGATGG CGGCCGGCGA TGTGCGACTC GGCGGGACAA TGCTGATTGC CGGGTTCCGT
GAATTGCGCG ATTTTTATCC GCCGTTCATC GCCGCCAACC TGGCTGCGCA GGGAATGGCA
GCGCGCGGCG TCTACCTGAC CATTCCACCT GCCTTCCGCA GACGTGAATA CAACCCGGTG
ACATTTGCGC GTCTGTTCGA TAATCCGGCG TTTTGCAGCG ATATTGGCAG GCAATTGCGC
GCACAACGCG GCGATGCAAC CCGGATCGGG CTGCCGGCGG TGCTCGGGTT GCGCGATCCG
ACAGGGGTTG TCGCCCATTT GCAGGACGAG AGCGGCGCGC AAATCTTCGA GATTCCGACA
TTGCCGCCGT CCGTTCCGGG TATGCGACTG TTTGCCCTCT TTCAGAATGC CATCGAACAG
GCAGGCGGTC GCGTGCAGAT TGGATCGGAA GTGATCTGCG GCGATGGACG GGATCGTCTG
TTGACGACCG TGTGGAGCGA GGCGGCGGCG CGCCGGCAGG AACATCGCGT CGAGCGCGCG
CTGCTGGCAA CCGGCGGAGT TGCGGGTGGC GGCATTCGGA CTGACCATAT GGGAATGGTG
CGCGAAACGG CGCTCGATTT GCCGGTGCGT GCGCCGGCGA ACCGCGCCGC CTGGTTTGCG
CCGCGTTTCC TCGATCCGCA GGGACACGCC ATCTACACGG CCGGCGTCGC AACCGATGCG
CACCTTCGAC CGATCGGGAC CGATGGCGCC GTTGTGTATG ACAATGTGAC AGTCGCCGGC
GCACTACTGG CTGGAACCGA CACCGTCCGT GAACGCAGTC GGAGTGGCGT TTCCCTCGCC
ACTGGATGGG CAGCCGGACG CATACTGGCA GAATGGATGG CATGA
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| Protein sequence | MRTTIVIGAG LSGLMGALAL AEAGLRPLVL AKGQGATHWT AGTVDIWGGD ERSPREALQE
IGALHPHHPY ALIGAHAVEE AIVRFRALTE AARYPYVGGL DRNILLPTSA GALRPAALLP
VTMAAGDVRL GGTMLIAGFR ELRDFYPPFI AANLAAQGMA ARGVYLTIPP AFRRREYNPV
TFARLFDNPA FCSDIGRQLR AQRGDATRIG LPAVLGLRDP TGVVAHLQDE SGAQIFEIPT
LPPSVPGMRL FALFQNAIEQ AGGRVQIGSE VICGDGRDRL LTTVWSEAAA RRQEHRVERA
LLATGGVAGG GIRTDHMGMV RETALDLPVR APANRAAWFA PRFLDPQGHA IYTAGVATDA
HLRPIGTDGA VVYDNVTVAG ALLAGTDTVR ERSRSGVSLA TGWAAGRILA EWMA
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