| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4109 |
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| Symbol | |
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| ID | 5541620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5320923 |
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| End bp | 5321915 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896221 |
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| Product | dihydroxyacetone kinase subunit DhaK |
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| Protein accession | YP_001434159 |
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| Protein GI | 156744030 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2376] Dihydroxyacetone kinase |
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| TIGRFAM ID | [TIGR02363] dihydroxyacetone kinase, DhaK subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.987034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0344371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATGC TCATCAATTC AGCCGATACG ATCATATCGG ACGCGCTGGA AGGTTTTGCA
CAGGCGTATC CGGGCATGGC GCGCGTGATA CGCAACCCGG ATTATGTCAT CAGAGCCGAT
GCGCCGCTCC AGAACCAGGT TGCTATCATT TCCGGCGGTG GCAGCGGGCA TGAGCCGATG
CACATCGGAT ACGTCGGTCG GGGAATGCTG ACAGCCGCCT GTCCCGGTGC GATTTTCACC
TCGCCAACTC CCGATCAGAT TCTGGCGGCG ACGCATGCTG CGGCAGGCGA TGCGGGAGTG
CTGTACATTA TCAAAAACTA TGCTGGCGAT CGGATGAATT TCGAGATCGC TATCGAGACT
CTTTTGCACG AAGGTGTGCC GACGGCAACG GTCGTTGTGG CAGACGATGT TGCCAACCCG
GCGCAGGACC TTCGGCGCGG CACCGGCGCC ACGATCATCG TCGAGAAGAT CGCCGGCGCG
GCTGCGGAAA TGGGCGCCTC GCTCACGGAG TGCGCACAGG TTGCGCGCCG CGCGCTCCGC
GAAAGCCGTT CGATAGGGGT CGCGCTTTCT GCCTGCACCA TACCTGCGTT GAATCGACCA
TCCTTTCATC TTGGCGACGA CGAGATCGAG ATTGGCATCG GCATTCATGG CGAAGCGGGT
CGGCAACGAA CTGCGCTCGC GCCGGTTTCA CAGATTGTCG ATCTGTTGTG CAGCGCGCTT
GCCGATGATC TCGGTCTGCA TACCGGGGAT CGCACGCTGG CGCTTGTCAA TGGACTCGGC
GCGACAACGC AGATCGAGTT GTATGTCGCC TTTTGCGAAG TTGCGCAATG GTGTGCAGCG
CGCGGCATTG CTATCGAACG CAGTCTGGTG GGCAACTATA TGACATCGCT CGATATGGCG
GGATGCACCA TCACACTGAT GCGACTGGAC GATGAGCTGC TTCAGTTGTG GGATGCTCCG
GTATGCACAC CCGCTCTGCG CTGGGGCAAG TGA
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| Protein sequence | MKMLINSADT IISDALEGFA QAYPGMARVI RNPDYVIRAD APLQNQVAII SGGGSGHEPM
HIGYVGRGML TAACPGAIFT SPTPDQILAA THAAAGDAGV LYIIKNYAGD RMNFEIAIET
LLHEGVPTAT VVVADDVANP AQDLRRGTGA TIIVEKIAGA AAEMGASLTE CAQVARRALR
ESRSIGVALS ACTIPALNRP SFHLGDDEIE IGIGIHGEAG RQRTALAPVS QIVDLLCSAL
ADDLGLHTGD RTLALVNGLG ATTQIELYVA FCEVAQWCAA RGIAIERSLV GNYMTSLDMA
GCTITLMRLD DELLQLWDAP VCTPALRWGK
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