| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4078 |
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| Symbol | |
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| ID | 5541589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5290185 |
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| End bp | 5291870 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896190 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001434128 |
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| Protein GI | 156743999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.35741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.385079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA ACAGATTACG CGCAATTCCT CTGGGCGGCG CCGGTGAAGT GGGCCGCAAT
ATGTGGGTGT TGGAACAAAA TGACGAGATT CTGGTGCTCG ATTGTGGGGT GATGTTCCCG
GAAGCCGATA TGCTCGGCGT TGATCTGGTG CTGCCGGATA TCACCTATTT GCGTGACCAG
AAGGACAAGA TCAAAGCCAT TGTGCTGACC CACGGCCACG AAGACCACAT TGGCGCTATA
CCGTATCTTG TACCCGAACT CGATTTCCCT CCGATCTATG GCACAACGCT GACCCTGGGC
ATGCTGACGG GGAAACTCAA AGAGCATCGT CTGCTCGACC GGGTCAGGCT GATGAAAATG
CAGGCGGGCG AACCGTTTAC GATCGGTTCA TTCACCATCG AGCCATTCAG TGTGGCCCAT
TCGATTCCCG ATACAGTCGG ACTGGCCATC GATACGCCGG TCGGACTGGT TATTTACCTG
ACCGACTGGA AATTCGATCA CACGCCGGTC GATGGACGCC CGACCGATCT GGTCAAACTG
TCGGAGTTGG GGCGGCGGTC GCCGTTGTTG CTGATTACCG ACTGCGTGCG CGTTGAGTCG
AAAGGGTATA CGCCAAGTGA GCAGGTCGTC GGCGAAGCGT TCGACTCAAT CTTCGCAACC
GCACCCGGTC GCATTATTGT AGCAACGTTT GCGTCGAACG TGTCGCGCGT GCAACAGGTC
ATCGACTCGG CGGAAGCGTA TGGGCGCAAA GTCATCGTCG CCGGACGGAG CATGGAGAAC
ACCACGCGCA TTGCGCTCGA GTTGGGCTAT CTCCGCGCAC AACAAGGAAC GCTGATCCGT
CCGCAAGAGG CGGCCGGTCT GACCGATGAC CAGGTGGCGG TCATCTGCAC CGGCAGCCAG
GGCGAGCCGA TGTCGGCGCT GGCGCGCATG GCAAACCGTG ACTATCCACA CGTCAAGATC
AAAGAGGGCG ATACGGTTGT GGTGTCGGCA ACTCCCATTC CCGGCAATGA GGTGTCGGTC
AATCGGGTGA TTAACAATCT GTTTCGCCTG GGGGCGGAAG TTATCTATAG CGACAATCCA
TCGGGGCTTG CCGTGCACGT CTCGGGTCAC GCTGCACAGG AAGAACTTAA AATGGTGCTG
GCCATTCTGC GACCCGAATT TGTTGTGCCG TTTCATGGCG ATTATCGCCA TATGATGCTC
TACCGAAAGC TCGCGCTCGG TATGGGCGGG TTGTTCTCCA ATTCGAATGT CATTATTCCC
GAAAATGGCG TAGTGATGGA GTTCAGCCGC AACTATGCCC GGACGACCGG TAAAGTTCCG
GTCGGGTACG TCTATGTGGA CGGAACAACG GTTGGTGACG TTGGGCAGGT GGTCGTGCGC
GACCGCCAAC TCCTGGCGCG CGATGGAATT CTGATGGTGG TCGTCAGCAT CGACCGAACA
ACCGGCGAAC TGGTGGCGGG ACCGGATGTT GTCTCACGCG GGTTCGTCTA TATGCGGCAG
TCGGATGATC TGATCGAGTC AACCAAGAAC ATTGTGCGGG ATGCATTGTC CCGGCGCAAT
GGCGGAGGCA AGACGGAAAT CGACAGCGCT TTCGTCAATC GTAAAATCAA AGATGTGGTT
AGCGATTATC TCTACGGACA GACCCGCCGC CGTCCAATGG TGTTGCCGGT CGTGATGGAA
GTGTAA
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| Protein sequence | MAKNRLRAIP LGGAGEVGRN MWVLEQNDEI LVLDCGVMFP EADMLGVDLV LPDITYLRDQ
KDKIKAIVLT HGHEDHIGAI PYLVPELDFP PIYGTTLTLG MLTGKLKEHR LLDRVRLMKM
QAGEPFTIGS FTIEPFSVAH SIPDTVGLAI DTPVGLVIYL TDWKFDHTPV DGRPTDLVKL
SELGRRSPLL LITDCVRVES KGYTPSEQVV GEAFDSIFAT APGRIIVATF ASNVSRVQQV
IDSAEAYGRK VIVAGRSMEN TTRIALELGY LRAQQGTLIR PQEAAGLTDD QVAVICTGSQ
GEPMSALARM ANRDYPHVKI KEGDTVVVSA TPIPGNEVSV NRVINNLFRL GAEVIYSDNP
SGLAVHVSGH AAQEELKMVL AILRPEFVVP FHGDYRHMML YRKLALGMGG LFSNSNVIIP
ENGVVMEFSR NYARTTGKVP VGYVYVDGTT VGDVGQVVVR DRQLLARDGI LMVVVSIDRT
TGELVAGPDV VSRGFVYMRQ SDDLIESTKN IVRDALSRRN GGGKTEIDSA FVNRKIKDVV
SDYLYGQTRR RPMVLPVVME V
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