| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4076 |
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| Symbol | |
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| ID | 5541587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5288844 |
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| End bp | 5289482 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896188 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001434126 |
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| Protein GI | 156743997 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.134405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.334505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGCGCAG CCAACATGCT TCAGCAAATT GCCGATGAAG TGCGCGCATG CACGGCGTGC
CGGCTGCATC AATCGGCGAT GAGAGCCGTT CCAGGCGAAG GACCGGCAGA CGCAAAAGTG
ATGTTCATTG GCGAGGCGCC CGGCTTTCAC GAAGATCGAC AGGGACGGCC GTTTGTTGGC
GCTGCCGGGC AATTTCTCGA GGAGTTGCTG GGGCTTGCCG GTTTGCGGCG CAGCGAGGTA
TTCATCGCCA ATGTCATCAA ACATCGGCCA CCTGATAACC GTGATCCGCT GCCGGATGAA
ATCGCCGCGT GTAGTCAGTT TCTCGAGCGG CAGATTGCAG CGCTGAACCC GCTGGTCATC
GTCACCCTCG GTCGTTTCTC GATGGCGCGC TGGTTTCCCG GCGAAAAAAT CTCCCGCATC
CACGGTCAAC CGCGCTGGAT CGAGGGTCGG ATGATCATTC CGATGATGCA TCCTGCTGCG
GCACTCCATC AACCGCAGTA TCGGGCATTG ATCGAAGACG ATTTTCGCAG ATTGCCGGAA
TTCATTGCGC AGGCGGAGAC AAAGAGCGCT CAGGCGGCTG CCGCTGTCGT TCCCGATAAG
CCGGATGAAC CCGAAGTGCA ACAATTGTCG TTGTTCTGA
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| Protein sequence | MSAANMLQQI ADEVRACTAC RLHQSAMRAV PGEGPADAKV MFIGEAPGFH EDRQGRPFVG
AAGQFLEELL GLAGLRRSEV FIANVIKHRP PDNRDPLPDE IAACSQFLER QIAALNPLVI
VTLGRFSMAR WFPGEKISRI HGQPRWIEGR MIIPMMHPAA ALHQPQYRAL IEDDFRRLPE
FIAQAETKSA QAAAAVVPDK PDEPEVQQLS LF
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