| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4069 |
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| Symbol | |
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| ID | 5541580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5282028 |
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| End bp | 5283299 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896181 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001434119 |
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| Protein GI | 156743990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.686351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TACGACAATT ATTCCGTCTG CGACTGCCGA TCTGGTTAGT GACGCCGTTG
CTGGCGTTTG TGCTGACGCT GGGAATCGGC GGCGGCTATC TGCTGGCGTT GCGTGTGACT
ACTCCCTGCC CGCTCCAGGC GCAAGAGTGC GCCGCGTTGA CGAATTTCTG GCGTGTGTGG
CAACTGGCGC GCGACCATTT TGTTGACCCG GCTGCGATTG ATCCGCAGCG CATGAGCGAC
GGTGCGATCA ATGGCATGCT CGATAGCCTG GGAGACCAGG GTCACACGCG CTACCTGAAT
GCAGACGAAG CCCGACGGGA GCGTGAGGCG CTTTCCGGCA GATTCGAGGG CATTGGCGCC
TATATCGACG TGCGCGACGG GCAGCCGCGA ATTGTCGCTC CTATCGAGGG ATCGCCAGCC
GAACGCGCCG GGTTGCGCCC CGACGACCTG ATTCTGCGCG TCGATGGATA CGATGTGCGG
GGGGTGACCG TGGAAGAACT GCGCAACCGG GTGCGTGGTC CAAAGGGGAC GCAGGTGGTA
TTGACCATTC AGCGCGCCGG TGTGGCAGCG CCGTTCGACG TGACGATTAC GCGCGAGGAG
GTGAATGTTC CCAGTGTCAC CTGGCGCATG CTGCCCGACC GTATTGCGCT GATCAAGATC
AATCGTTTCG CCGAGCGCAC CGGAGCGGAG TTGCAACAGG CGCTGCTGGA GGTTCGGGCG
CAGAAGGCGC AGGCGATCAT TCTCGATCTG CGCAACAACC CCGGTGGTCT GGTGACGCAA
CTGGTCGCTG CGGCCAGTCA GTTTATGCCA GAAGGGAGCA CGGTGCTCAT CGAACAGGAC
CGTGACGGCG CCCAACGGCC ATACACAACC ACCGAAGGCG GACTGGCGCT CGATATTCCG
CTGGTTGTGC TGGTGAACAA CAACAGCGCC AGCGCCGCCG AGATCCTGGC AGGCGCGTTG
CAAGAGAACG GACGCGCGCG CGTGATCGGG CAGGCGACGT TTGGCACGGC AACGGTTCTG
CGTCCGTTTG ATCTGGAAGG CGGCGCACAG GTGCGTCTGG GCGCCTCACA GTGGCTGACG
CCGAAGGGCA GGGTGGTGCG CGGTGTGGGC ATTCAGCCCG ATGAATTGAT CGCGCTGGCG
CCAGGGGTTG CGCCACTCAC CCCGACTGAA GCGGCAACTC TCACCCCGGA GGAATTGCAG
CGCAGTCAGG ATATTCAGTT GTTGCGCGGG CTTGAAGTAG TGCGCGAGGC GCTGGCGCAA
AAAACGTCGT AA
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| Protein sequence | MNILRQLFRL RLPIWLVTPL LAFVLTLGIG GGYLLALRVT TPCPLQAQEC AALTNFWRVW
QLARDHFVDP AAIDPQRMSD GAINGMLDSL GDQGHTRYLN ADEARREREA LSGRFEGIGA
YIDVRDGQPR IVAPIEGSPA ERAGLRPDDL ILRVDGYDVR GVTVEELRNR VRGPKGTQVV
LTIQRAGVAA PFDVTITREE VNVPSVTWRM LPDRIALIKI NRFAERTGAE LQQALLEVRA
QKAQAIILDL RNNPGGLVTQ LVAAASQFMP EGSTVLIEQD RDGAQRPYTT TEGGLALDIP
LVVLVNNNSA SAAEILAGAL QENGRARVIG QATFGTATVL RPFDLEGGAQ VRLGASQWLT
PKGRVVRGVG IQPDELIALA PGVAPLTPTE AATLTPEELQ RSQDIQLLRG LEVVREALAQ
KTS
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