Gene Rcas_4065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4065 
Symbol 
ID5541576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5276151 
End bp5277038 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content62% 
IMG OID640896177 
Productmethyltransferase type 11 
Protein accessionYP_001434115 
Protein GI156743986 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.991618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0815821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA TGGCTGGTAT GGTCACTGCC GAAACTACAG TCGAGCAGGC GCCGGCGCGC 
CCCAAACCGG TCTCGCTTCC GGCGTGGCGC TGCGTGCTAT ACGAAGTTGC GCTCAATGGT
CTGCGCATTC TGTGGGAAAC AGTCAATGAT TTCAGCCTCT GGCGACTGAT CGAATACCCC
TGGGCAACCC GCGCGCTCGG CATTGCGCGG GGCGACACGG TGGTGGACAT CGGTTCCGGC
ACCTCGTCAT TCCCGCACAT GCTGGCGAAA GAAGGCGTGA ATGTCGTGAT CGTCGAGATT
GAACATCGCC GTGTGCGCTG GCAACGCGAC AAGCGCCGCG CGACGGCGCG CCCCGGCGAC
GGCGAGTTGC TGCCAATCGT CGCCGATGCG ACCCGACTAC CGTTTCGCAG CGGTTCGGTA
CCGTCCATCA GCGCCATTTC GTCGCTCGAG CACATTCCCG ATGATGCGGC TGTGGGGCGT
GAGATCGGGC GGGTGTTGGC GCCGGGCGGC ATCGTCGCGC TGACGCTGCC GTTTACGGGC
AGCGAGCGGA CCTCGTTCTT CGCCGGAATT CGCCCGTTCA AACAGGTGGC GCGCAACGCC
TTCGTTCAGG AAGGGAAACC CGGATCGTTT TTCCGTTTCT ATACCGACGA TGACATCCGC
CAGACCTATA TTGAGCCGGC GAATGCCGAG GTCGTTGAAC GTCGCGCATT TGGGCGCAGC
ATCCTTAACG GACGGTACCA CGAGACGCGC CTGACCAGGT TCTGGCGGCG GATTGTGTTG
AAAGATCTGT TGCTGGCGTG GCTGATCCAC CCGCTCGAAG AACGATTTGA TCGCTCCGAT
CCACTCTACG TTATGCTGGC GCTGCGCAAG CGTCGTGAAG AACCGTGA
 
Protein sequence
MKGMAGMVTA ETTVEQAPAR PKPVSLPAWR CVLYEVALNG LRILWETVND FSLWRLIEYP 
WATRALGIAR GDTVVDIGSG TSSFPHMLAK EGVNVVIVEI EHRRVRWQRD KRRATARPGD
GELLPIVADA TRLPFRSGSV PSISAISSLE HIPDDAAVGR EIGRVLAPGG IVALTLPFTG
SERTSFFAGI RPFKQVARNA FVQEGKPGSF FRFYTDDDIR QTYIEPANAE VVERRAFGRS
ILNGRYHETR LTRFWRRIVL KDLLLAWLIH PLEERFDRSD PLYVMLALRK RREEP