| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4064 |
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| Symbol | |
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| ID | 5541575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5275284 |
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| End bp | 5276120 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896176 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001434114 |
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| Protein GI | 156743985 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.487787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0458657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCCA AGGAGCGACC GATGGACGCC AACTGGATTA TAGCTGCTTT CGTGCTGATC
GACACACTGA TGGAGCGCCT GGGCCATCAC CGTGATGTGC GCGCCCAGGT TCCTGATTCG
GAGGTCATCC TGATCGCGGT CGTTGCGGCC AAGGACTTTC AGAATCATCA CGAGCGCGCC
GTGTGCATCG TGCGCCAAAC CCGCTCCCTG TCGGGACCCA TTGATGTCAC GCGCTTCAAC
CGTCGGCTGC ACAAGCTGGC AGACTGGCTG AGCTTCATTG CCACGACGTT GGGTGCCATC
CTGCGGCGTG GCGAGGTGTT TGTGATCGAG AGCCTGCCAC TGCCCGTCTG TCGACGCGTG
CGGGCGCGGC GCTGTCGCAA GGTCTGCGGA CGTGCCTCCT GTGGCGAGTG CGCTGCGAAG
AAAGAGAAGT TCTTCGGCTG GCGCTTGCAT CTGATGTGCA CGCCAAGCGG TATACCCGTC
AGCTTTCAGT TGCTGCCGGC AGCATTCCAT GATGTGACGC CCGTGCACGA ATTGGCCGTG
GTGTTGCCGC CCGGCGCGCG CTTGTTCGGT GATAAAGCCG ATACCAGCGC CGCGGATGAG
ACCAGCATGC TGGCAGACAC GGGCGTACGG CGCATCCCAG TACGACGGGA AAAGATGCAG
CCACATGCCT GGTTTGTGGA TGCCATCGAG TTGGGTGACT ATCGGCATAC GATTGAAACC
GTCAACCGTC AGTGTGAAAA AATGGGCATG GAACGCCTGT ACGCACGCAC GAATACTGGC
TTCGAGTTGA AAGTGCTGGC CGCGATCATT GCCTTGGCCT GTACGAACAT GGACTAG
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| Protein sequence | MIAKERPMDA NWIIAAFVLI DTLMERLGHH RDVRAQVPDS EVILIAVVAA KDFQNHHERA
VCIVRQTRSL SGPIDVTRFN RRLHKLADWL SFIATTLGAI LRRGEVFVIE SLPLPVCRRV
RARRCRKVCG RASCGECAAK KEKFFGWRLH LMCTPSGIPV SFQLLPAAFH DVTPVHELAV
VLPPGARLFG DKADTSAADE TSMLADTGVR RIPVRREKMQ PHAWFVDAIE LGDYRHTIET
VNRQCEKMGM ERLYARTNTG FELKVLAAII ALACTNMD
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