| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4061 |
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| Symbol | |
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| ID | 5541572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5270727 |
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| End bp | 5271341 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896173 |
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| Product | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase |
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| Protein accession | YP_001434111 |
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| Protein GI | 156743982 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000127411 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0359854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTCGTT TGCTGATAGC CACAACCAAT CCCGGCAAAT TGCGGGAGTA TGCAGCGATC
TTCGCTGATC TGCCGCTTGA TCTCTGCACA CTGGCGGACC TTGGCATTCA GGATGATGTC
GAAGAGACGG GCGCAACCTT TGCCGAGAAT GCGCGCATTA AGGCGGAATA CTACGCGCAA
CGCAGCGGGT TGCCGACCCT TGCCGACGAC TCTGGGCTGG AAGTGGCGGC GCTCGGCGGC
GAACCCGGCG TCCGCTCGGC GCGTTATGCC GGTCCTGAAG CGACCGATGC CGAACGCAAC
GCCTTCTTGC TGCGTAAACT CGAACATGTG CCTTTCCACG CGCGTTTGGC GCGCTTCGTC
TGCGTCATTG CCCTGGCGCT GCCCGGCGGT CCGATCGAGT TTGTCGAGGG GGTCCTCCCC
GGTGTGATCG AGTTCGAGCC GAAAGGTCAC TACGGTTTCG GGTACGATCC GATCTTTTAC
GTTCTCGACG AAGATGCGAC ACTGGCGGAG CTTCCGCCGG AGCGCAAGAA TCAGATCAGC
CATCGCGCGA ATGCTGCGCG CGCTGCGCGT GATGTGTTGC GGCGCTGGCT CGATGAGGGG
TGGCCTGGTC CATGA
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| Protein sequence | MPRLLIATTN PGKLREYAAI FADLPLDLCT LADLGIQDDV EETGATFAEN ARIKAEYYAQ
RSGLPTLADD SGLEVAALGG EPGVRSARYA GPEATDAERN AFLLRKLEHV PFHARLARFV
CVIALALPGG PIEFVEGVLP GVIEFEPKGH YGFGYDPIFY VLDEDATLAE LPPERKNQIS
HRANAARAAR DVLRRWLDEG WPGP
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