| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4060 |
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| Symbol | |
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| ID | 5541571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5269613 |
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| End bp | 5270596 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896172 |
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| Product | UbiA prenyltransferase |
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| Protein accession | YP_001434110 |
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| Protein GI | 156743981 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000422239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0105884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA TTGCTGAGAT CGAACTGACA CGCGCGCGCG GCGGCGCCAT GCTCATTGAA
CTGTTGCGCG CCATGCGCCC AAAAGAATGG ATCAAGAACA CGTTCGTGTT CGCTGCGATT
GTGTTTTCCC AGCAGCGACT GTGGATGCAC GTGGATGCTG TACTGACCGT AACTCTCGCA
TTCGCGCTTT TTTGCATGGT TGCCAGTGCA ATCTACCTGC TCAACGATCT GGTCGATATG
GAAAAAGACC GGGCGCATCC GAAGAAACGC AACCGTCCGC TGGCATCGGG GCGGCTCAGC
CCACGCATCG CGGCATTGAC CGCAGTGGCG CTGGTCGTTG TCGCGCTGCC GCTCAGCGTG
GCGCTCGATC TGAGTTATGC ACCGCCTGGC GATAGCACAA CCTGGTTTGG CTACAATTAT
GACTTCCCGG CTGCTTTGTT TACCTATGCG ATCATCCAGG GAGTGGCATA TTCCTACTAC
TTTAAGCATG TCGTGATTAT GGATATTTTC ACCATTGCCG CAGGTTTTGT GCTCCGCGCC
GTAGCGGGAG CAATGGTCAT CGACATTGCC ATTACGCCCT GGTTGCTCAT CTGCATGGGA
TTGCTCGCCC TCTTCCTGGG TCTGGCAAAG CGTCGCGCCG AGCTGGTGCT GCTGGAGAAC
GGCGCCGGCG CGCACCGACG TATTCTCGAT GAGTATTCGC TGCCGCTCCT CGACCAGATG
ATGTCGATCG TCACTGCCGC CACAATCATC GCGTATACGC TGTTTACGTC AACTGCCGAA
ACATTGCCGC ACGAACCGTT CCCGGTGATG ATGATCACGG TGCCGTTCGT CGTCTACGCT
ATCTTTCGCT ACCTCTATCT GATCTACAAA CAGGATGGCG GCGGCAGCCC TGCCGATCTC
GTGTTGAGAG ACATGCCGCT TGCCTCATGC ATTGTGCTGT GGGGACTGAC CTCGGTGGCG
ATCCTGGCGG CGTTTGCGTC GTGA
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| Protein sequence | MEQIAEIELT RARGGAMLIE LLRAMRPKEW IKNTFVFAAI VFSQQRLWMH VDAVLTVTLA
FALFCMVASA IYLLNDLVDM EKDRAHPKKR NRPLASGRLS PRIAALTAVA LVVVALPLSV
ALDLSYAPPG DSTTWFGYNY DFPAALFTYA IIQGVAYSYY FKHVVIMDIF TIAAGFVLRA
VAGAMVIDIA ITPWLLICMG LLALFLGLAK RRAELVLLEN GAGAHRRILD EYSLPLLDQM
MSIVTAATII AYTLFTSTAE TLPHEPFPVM MITVPFVVYA IFRYLYLIYK QDGGGSPADL
VLRDMPLASC IVLWGLTSVA ILAAFAS
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