| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4054 |
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| Symbol | |
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| ID | 5541565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5260684 |
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| End bp | 5261997 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896166 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001434104 |
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| Protein GI | 156743975 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0519542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA TTGCTATGAT GCACACTCCC CGTTCAGGCT ACCGCTGGTT CGTGATTGCA
GTCTTTTTTT GCTTCATGCT GCTGCACCAG GCGGATAAAC TGCTGATCGG ACCGCTGACC
CCCGCGATTA TGGATGAATT CGGCATCACC ATGACTCAGA TGGGGGCGGT GACGACCGGC
GCGCTGGTGG TGGCATCAAT CCTCTATCCC ATCTGGGGCT ACCTGTACGA CCGGTTTGCC
CGCGCGCGGT TGCTGGCGCT GGCATCGTTC ATCTGGGGCG CGACGACCTG GTTGAGTGCA
ATCGCGCGTA CTTACCCGAC GTTCCTGGCA GCGCGCGCCT CGACCGGCAT TGATGACTCG
TCGTACCCCG GCATGTACGC GCTGGTTGCC GATTATTTCG GTCCCAACCT GCGCGGCAAA
GTGTATGGGC TGTTGCAGCT GGCGCAGCCA ATCGGCTACC TGATCGGCAT GGTGTTGGCG
TTGATGCTGG CGCCGCAGAT CGGATGGCGC ACCATATTTT TTTTCACTGG CGGGTTGGGA
ATTGTGGTCG CGCTCGTCAT TTTGTTGGGC GTCCGCGAAA TGCCGCGCGG CAAAGCGGAA
CCAGAGTTCG AGGGAATGAC CGAGATGGCG CGCTTCCGTT TCTCGTGGGC GGAGATGCGC
GCCGTGCTGG GGAAACGCAC GATGTGGTTC GTCTTTCTCC AGGGATTTGC CGGCGTCTTC
CCGTGGAATG TCATCACTTA CTGGTTCTTC ACCTACCTGG CGCGTGAGCG CGGCTACGAC
GAAAGCAGCA TTTTGCTGAC CGTTGCGCCC GTCATCCTGA TTCTGGCGAG CGGCAGTTTC
ATCGGTGGGG TATTGGGTGA CTGGGCATTC AAACGCACCA CGCGCGGACG GATCATCGTG
TCGAGCATTG GCGTGCTCAT GGGAGCGATT TTCCTGTATC TGGCGATGCA AACGCCGGTC
GAAGCGCGCA CGACGTTCTT CGTGCTCATG TGCCTGACGG CGCTCTTCAT GCCGCTTTCA
TCACCCAATG TCATTGCTAC GGTGTATGAT GTGACGGTGC CGGAGGTGCG CAGTACGGCT
CAGGCGGTCG AATATTTCAT CGAGAACAGC GGTGCGGCGC TGGCGCCGCT TCTGGCGGGC
ATTATTGCAG ATATGTACAA CCTGCAAACC GCCATTACGT GGATCTGCGT CACTGCCTGG
GCGCTCTGCT TTATGTTCTA TCTTGGCGCG TTGCGCTACA TTGAGCGCGA CCACCATGCT
CTGCGCGATG AGATGGGGCG TCGCGCAGCA TCCTTCCGGC AGACGATGGC GTAG
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| Protein sequence | MSEIAMMHTP RSGYRWFVIA VFFCFMLLHQ ADKLLIGPLT PAIMDEFGIT MTQMGAVTTG
ALVVASILYP IWGYLYDRFA RARLLALASF IWGATTWLSA IARTYPTFLA ARASTGIDDS
SYPGMYALVA DYFGPNLRGK VYGLLQLAQP IGYLIGMVLA LMLAPQIGWR TIFFFTGGLG
IVVALVILLG VREMPRGKAE PEFEGMTEMA RFRFSWAEMR AVLGKRTMWF VFLQGFAGVF
PWNVITYWFF TYLARERGYD ESSILLTVAP VILILASGSF IGGVLGDWAF KRTTRGRIIV
SSIGVLMGAI FLYLAMQTPV EARTTFFVLM CLTALFMPLS SPNVIATVYD VTVPEVRSTA
QAVEYFIENS GAALAPLLAG IIADMYNLQT AITWICVTAW ALCFMFYLGA LRYIERDHHA
LRDEMGRRAA SFRQTMA
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