| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4050 |
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| Symbol | |
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| ID | 5541561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5254696 |
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| End bp | 5255523 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896163 |
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| Product | cyclase family protein |
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| Protein accession | YP_001434101 |
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| Protein GI | 156743972 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1878] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0384767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCCCC CGGAAACGCT CGCCAGCATG CGGTCTCCTG AAATCAGCCG ACGCAACCTG
CTCAAATTCG GGCTTGGCGC AGCCGCTGCC GCCGCGCTGC CGATCGGTTC GGCGCAAGCG
GCGACGGTGC GCCGAACGAC GTTTCGGAAT GTGCTCGACC TGACTCATGT GCTCGGCACA
CAGTTTCCGC TTTTTCCCGG AGCGGCGCCG TTCCGCATTC AGCAGGCGGT CTCGCACGAT
AAAGATGGCT ACTATGGGAG TATTTTGACC TACTGGGAGC ACTCAGGAAC CCACATGGAC
GCGCCGGTGC ATTTTGCGCC GAACGGGTTA TTTGTCGATC AGTTGCCGGT AGAAAATCTG
GTCGTTCCGG CGGTGGTCAT CAATATTACC GAAAAAGTGC GTCGCGATCC CGACTCTGTC
GTGACGCCGG ACGATATTCG CGCATGGGAG CGACGTTATG GGCGCATCCC CGACAATGCC
GCCGTGCTGA TGGCAAGCGG TTGGGGCGCG CGAGCCGGTT CGGTCGAGGC GTTCCGCAAT
ACCGACGGCA GCGGCGTGAT GCACTTCCCC GGGTTTGGCA AGGAGGCGAT CGACTTTCTG
CTGACCGAAC GGCGCATCTC CGGTATCGGG GTGGATACGT TGAGCCTCGA TCATGGTCCA
TCGACGACGT TTGCCGTCCA CTACACGATC CTGCCGACGA ACCGGTGGGG ATTGGAGAAC
CTGGCGAATC TGGAAGCGAT TCCGCCGAGC GGCGCGACGC TCTTCGTCGG CGCGCCGAAA
ATTGCGGCAG GCTCTGGCGG ACCAACGCGC GTGATGGCCG TCTGGTGA
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| Protein sequence | MCPPETLASM RSPEISRRNL LKFGLGAAAA AALPIGSAQA ATVRRTTFRN VLDLTHVLGT
QFPLFPGAAP FRIQQAVSHD KDGYYGSILT YWEHSGTHMD APVHFAPNGL FVDQLPVENL
VVPAVVINIT EKVRRDPDSV VTPDDIRAWE RRYGRIPDNA AVLMASGWGA RAGSVEAFRN
TDGSGVMHFP GFGKEAIDFL LTERRISGIG VDTLSLDHGP STTFAVHYTI LPTNRWGLEN
LANLEAIPPS GATLFVGAPK IAAGSGGPTR VMAVW
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