Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4043 |
Symbol | |
ID | 5541554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5244117 |
End bp | 5244938 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640896156 |
Product | nitrogenase iron protein |
Protein accession | YP_001434094 |
Protein GI | 156743965 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0162942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAGG TCGCTTTTTA CGGCAAGGGC GGAATCGGCA AGTCCACCAC ACAGCAGAAC ACTGCTGCCG CACTCGCGTC GATGGGGTAT CGGTTGATGG TCGTCGGGTG CGACCCCAAG GCAGATTGCA CCCGCCTGCT GCTGCGCGGC GTGCGCCAGC CATCGGTGCT CGATACCCTG CGCGATGTCG GTCCTGAAAG CGTCCAACTT GAAAAGGTGG TCGTTCAGGG GTACGGCGGC GTCAAATGTG TCGAATCGGG CGGACCTGAA CCCGGCGTTG GCTGCGGTGG GCGCGGGGTG ATTACCGCCA TTCAAACCCT CGAAACTCTG GGCGCGTATA AGGACGACCT TGATTATGTC TTCTACGATG TCCTTGGCGA CGTCGTGTGC GGCGGGTTTG CGATGCCGAT CCGCGAAGGG TATGCCGAAG AGATCTACAT CGTCTGTTCC GGCGAGTACA TGGCGCTCTT CGCGGCCAAC AACATTTGCA AAGGCATTAA GAAGTTCGCC GAACGCGGCT ATGCCCGCCT CGGCGGACTC GTCTGCAATT CGCGCCTGGT CGAAAATGAA CAGGCGCTGG TCAAGGAGTT CGCGCGTCGT CTCAACACGA AGATGATCCA CTTCATCCCG CGCAGCAAAG ACGTCCAGCG CGCCGAGATC AACAAGAAAA CCGTCATCGA CTACGATCCC GATCTGCCGC AGGCGCAAGA GTACCGCGAA CTGGCGCGCA AGATCGATGA GAACGACGAG TTTACCATCC CAACTCCTAT CACCCAGGAA GAACTCGAAG ATTTGATGCG CGAGTACGGC ATTGTCGATT AG
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Protein sequence | MRQVAFYGKG GIGKSTTQQN TAAALASMGY RLMVVGCDPK ADCTRLLLRG VRQPSVLDTL RDVGPESVQL EKVVVQGYGG VKCVESGGPE PGVGCGGRGV ITAIQTLETL GAYKDDLDYV FYDVLGDVVC GGFAMPIREG YAEEIYIVCS GEYMALFAAN NICKGIKKFA ERGYARLGGL VCNSRLVENE QALVKEFARR LNTKMIHFIP RSKDVQRAEI NKKTVIDYDP DLPQAQEYRE LARKIDENDE FTIPTPITQE ELEDLMREYG IVD
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