| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4042 |
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| Symbol | |
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| ID | 5541553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5243148 |
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| End bp | 5244089 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896155 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001434093 |
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| Protein GI | 156743964 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00822978 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGCTT CATCCGCCGG ATCGTGCCAG GGCGTCTGTT TTCCCAAGGT TGATCTGAGC
ACGCATCCGT GTTATAGCCG GGCAGCGCAT TTCCGCTTCG GACGCATCCA CGTGCCGGTG
GCGCCCCGTT GCAACATCCA GTGCAACTAT TGCATTCGCA AATACGCATG CCCAAACGAA
AATCGTCCCG GCGTCACCAT GCGGGTCATG TCGCCCGACG AGGCGCTCCA CACCGTCCGC
CACGCCATCG CCCACGACCT GCGCCTCCGC GTCCTTGGCG TGGCCGGTCC AGGCGATGCG
CTGGCAAATC AGGCGACGCT CACTACGTTC GAGCGCGCGC GCGCTGAGTT TCCGCACCTG
ATCCGCTGCC TCTCGACCAA CGGCTTGCTG CTGCCGGATC AGATCGACGC CATCGAGCGG
GCCGGGATCA CCACGCTGAC GATCACGATC AATGCGGTCG ATCCGGCAAT TGGCAAGCAG
ATATACGCCC ATGTGCGCTA TCGGGGCAAA ACCTACCGCG GGCGCGAGGC AAGCACACTG
CTCCTGCACA ATCAGTTGAT CGGACTGCGC GAAGCGGCAC TGCGCGGTAT AGTGGTTAAG
GTGAACTCAG TGCTCATTCC CGGTATCAAC GATCATCACC TGATCGACGT CGCGTGCGTC
GTCAAAGATC ACGGCGCCTC CATCATGAAC ATCATCCCGC TCATACCCCT GGCGAAGTTT
GCGCACCTGC CGGAACCCTC ACCCGAACTG CTCAACCGGG TGCGCGACGA GTGCGCGACC
GTCATCGAAC AGTTTCGCCA CTGCCAGCGA TGCCGCGCCG ATGCCATCGG CGTTCCCGGC
GAGGAGGGGT GCGGTACGGG CGAACGAGTC TGTATTCCCA GATTTTTGGC ACAGCGGAAG
GAGCACACCC ATGCAGTTCA AGTGCAATCA GACCCTGCCT GA
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| Protein sequence | MDASSAGSCQ GVCFPKVDLS THPCYSRAAH FRFGRIHVPV APRCNIQCNY CIRKYACPNE
NRPGVTMRVM SPDEALHTVR HAIAHDLRLR VLGVAGPGDA LANQATLTTF ERARAEFPHL
IRCLSTNGLL LPDQIDAIER AGITTLTITI NAVDPAIGKQ IYAHVRYRGK TYRGREASTL
LLHNQLIGLR EAALRGIVVK VNSVLIPGIN DHHLIDVACV VKDHGASIMN IIPLIPLAKF
AHLPEPSPEL LNRVRDECAT VIEQFRHCQR CRADAIGVPG EEGCGTGERV CIPRFLAQRK
EHTHAVQVQS DPA
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