| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4024 |
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| Symbol | rplW |
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| ID | 5541534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5223954 |
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| End bp | 5224238 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640896136 |
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| Product | 50S ribosomal protein L23 |
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| Protein accession | YP_001434075 |
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| Protein GI | 156743946 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0089] Ribosomal protein L23 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.707217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000264859 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATGCGC ATCAGATCAT CATACGACCG CTGATCACGG AGAAGAATAC CAACCTGATG
CGGTTCAACA AGTATTCGTT TGAGGTTGAT CGCAACGCCA CCAAACAACA GATCAAACGC
GCGATCGAAG AGATTTTCAG CGTGCGTGTC ACTGCCGTTC ATACCATGAA TGTGCGCGGG
AAACTGCGCC GCCGGGGACG GCAGTACGGC TATACGCCCG ATTGGAAAAA GGCGATCGTC
ACCCTGGCTG AAGGTGATCG CATCGACCTG TTTGAGGGAG CCTGA
|
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| Protein sequence | MNAHQIIIRP LITEKNTNLM RFNKYSFEVD RNATKQQIKR AIEEIFSVRV TAVHTMNVRG
KLRRRGRQYG YTPDWKKAIV TLAEGDRIDL FEGA
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