| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4023 |
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| Symbol | rplB |
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| ID | 5541533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5223123 |
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| End bp | 5223950 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896135 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001434074 |
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| Protein GI | 156743945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.796821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000688583 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGTGA GAAAATACAA ACCAACCTCG GCAGGTCGCC GCAATATGTC GGTCTCGACC
TTTGAGGAGA TTACCAAGAA GGAGCCGGAG CGATCATTGC TCGAGCCGCT GCGGAAGAAA
GCCGGGCGCA ATGTCTATGG GCGCATTACG GTGCGTCATC GCGGCGGCGG TCATAAGCGC
CATTATCGCA AGATCGACTT CAAGCGCGAT AAGGTCGGTA TTCCGGCAAA AGTGGCGGCG
ATTGAGTACG ATCCGAACCG ATCTGCGCGT ATCGCGCTGC TTCATTATGT CGATGGCGAG
AAACGCTACA TCCTCGCGCC GCTCGGCTTG AACGTCGGCG ATACGGTCAT GAGCGGGCCT
GCCGCCGATA TCCGCGTCGG CAACGCCTTG CCGCTGCGCC AGATACCGCT TGGGACGCAG
GTGCACAACA TCGAGCTCGA AAAAGGACGC GGCGGCGTGA TGGTGCGGAG CGCCGGGGCA
GCGGCTCAGT TGATGGCGAA AGAAGGGAAC TACGCCACAC TGCGTATGCC ATCGGGCGAG
GTGCGCCGGG TGTTCATCGA GTGTATGGCG ACGATTGGGC AGGTTGGCAA TCTGGATCAC
CAGAATGTGC GCCTGGGGAA AGCGGGGCGG AAACGCTGGC TTGGGCGGCG CCCCGAAGTG
CGTGGCGCGG CAATGAACCC GCGTGACCAT CCCCATGGCG GCGGTGAAGG GCGCGCACCG
CGTGGTATGC CGACCCCGAA AACTAAATGG GGGAAACCGG CGCGTGGCGT GAAGACCCGC
CATAACCCGC GGACCGATGC CTTCATCATC CGCCGTCGAA CGCGGTAA
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| Protein sequence | MPVRKYKPTS AGRRNMSVST FEEITKKEPE RSLLEPLRKK AGRNVYGRIT VRHRGGGHKR
HYRKIDFKRD KVGIPAKVAA IEYDPNRSAR IALLHYVDGE KRYILAPLGL NVGDTVMSGP
AADIRVGNAL PLRQIPLGTQ VHNIELEKGR GGVMVRSAGA AAQLMAKEGN YATLRMPSGE
VRRVFIECMA TIGQVGNLDH QNVRLGKAGR KRWLGRRPEV RGAAMNPRDH PHGGGEGRAP
RGMPTPKTKW GKPARGVKTR HNPRTDAFII RRRTR
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