| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4021 |
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| Symbol | rplV |
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| ID | 5541531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5222437 |
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| End bp | 5222778 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896133 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001434072 |
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| Protein GI | 156743943 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.552506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000514416 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGGCAA AAGCAGTAAC CAAATATGTC CGCATCTCGC CAACCAAGGT GCGCCCGGTA
ATGGACCTGG TGCGCGGCAA GCCGGTTGAT CGGGCGCTGG CGATCCTGCG CTATTTGCCG
CACAAAGCGG CGCGCGAAAT CGCTCGCACG ATTGAGTCGG CGCGAGCAAA TGCCACCAAT
AACTACGATA TGGCGCCCGA TGCACTGGTG GTGAAGTATA TCTTCGCTGA TGAGGGTCCG
GCATTCAAGC GCATTATGCC ACGCGCCCGC GGTCGCGCCG ATCGTATTCG GAAGCGGACG
ACCCATATTA CGGTGATTGT CGATGACGGT GAGGAGATGT AG
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| Protein sequence | MQAKAVTKYV RISPTKVRPV MDLVRGKPVD RALAILRYLP HKAAREIART IESARANATN
NYDMAPDALV VKYIFADEGP AFKRIMPRAR GRADRIRKRT THITVIVDDG EEM
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