| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4016 |
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| Symbol | rplN |
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| ID | 5541526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5220329 |
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| End bp | 5220697 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896128 |
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| Product | 50S ribosomal protein L14 |
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| Protein accession | YP_001434067 |
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| Protein GI | 156743938 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0093] Ribosomal protein L14 |
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| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0331608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000209267 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTGCAGC AGGAAACGCG CCTGCGCGTC GCCGATAATA CCGGCGCCAA AGAGATACTG
TGCATCCGCG TGTTGGGCGG CTCGCATGTG CGCTACGGGC GCGTCGGCGA TGTTATTGTC
GCTTCGGTCA AGGAAGCGAC TCCCGGCGGC GCGGTGAAGA AAGGCGAAGT GGTGCGCGCC
GTCATCGTGC GCACTGCTAA GGAGTATGGT CGACCCGATG GCTCGCATAT TCGGTTCGAT
GATAATGCGG CAGTGATCAT CGGGAAAGAC AATAATCCAC GTGGTACGCG CATCTTTGGA
CCCGTCGCAC GTGAGTTGCG TGAACGCGCG TTCATGAAGA TCATCTCGCT GGCGCCGGAA
GTGCTGTGA
|
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| Protein sequence | MVQQETRLRV ADNTGAKEIL CIRVLGGSHV RYGRVGDVIV ASVKEATPGG AVKKGEVVRA
VIVRTAKEYG RPDGSHIRFD DNAAVIIGKD NNPRGTRIFG PVARELRERA FMKIISLAPE
VL
|
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