| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4006 |
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| Symbol | |
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| ID | 5541516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5214797 |
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| End bp | 5216149 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896118 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_001434057 |
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| Protein GI | 156743928 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000605815 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000026914 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGAAT CGGTTGTCAA CGCGCTCCGA TTGCCCGATC TGCGGCAGCG CATCCTGTTC
ACGCTGGCAA TGCTGCTGCT CTTTCGGCTG ATTGCTCACA TTCCTGTGCC GAACATCGAT
CCGATGGCGC TGGAAAGCCT GCGGCTCGCT TTGCAGGGCA ATCAGCTCGC GCAGTTACTC
AACATTTTCG CCGGCGGCGC ATTGCAGAAC CTGTCGGTTG CGGCGATGGG CGTCTATCCG
TACATCACAG CGCAGATCAT TCTGCAACTC CTGGTACCGC TCATTCCGGC GCTGGAAGAA
TTGCGGAAAG AGGGCGAACA GGGGCGCATG CGGTTGAACC GGATCACGTT CTACCTGACG
ATCCCGATGG CGCTGTTGCA AGCCTATGGG CAAACGTTGA CGCTTGAACG CAGCCTCAGA
ACCGGTCAGG CGCTGTTTCA AACGCCGTTC GATATTGTCA ATAATTTCTT CCCGACGTTC
ACAATCCTGA TGAGTATGCT GGCAGGTACG ATGCTGCTGG TGTGGCTTGG CGAGCAGATC
CAGGAACGCG GGATCGGCAA CGGCGTCTCG ATGATTATTT TCGCAGGCAT TGTAGCCGGT
TTGCCGGGGT TGATCATTCA GGCATTCACC ACCGTCGAAC TGGGCGGGCT GGAACAGGCC
ATCGGCTTGA TCGCCTTCCT GATCATCGCA CTTGGAACGA TCATCGGCAT CGTGCTCATG
CACGAGGGGC AGCGGCGCAT CCCGGTGCAA TACGCCAAGC GGGTGCGCGG CAATCGCGTG
TATGGCGGGC AGAGCAGCCA TATTCCGCTC AAGGTCAATA TGGCAGGCAT GATCCCGCTG
ATCTTCGCGC AGAGCATCAT TATTTTTCCG GGCACAATCG CCTCCTACGG CTGCCCTGAA
CAAGTGGCGC CTCCCAACGC AAGCGTGCTG AAGCAGATCG CCTGCTTCAC CTATCAGACG
TTCAGCCCGC AGTATGGCGG CGGCACCCTG GTGTACTCGA TCGCGCTCTT CGTGCTGGTT
TATTTCTTCA CCTACTTCTA TACGAAGGTG ATTTTCGACC AGCAGAATAT CCCGGAGACG
CTGCAACGCA ACGGCGGATT CATTCCGGGT ATTCGGCCCG GGAAACGCAC TGAAGAGTAT
CTTGACCAGG TGGTGAGCCG AATCACACGA ATTGGCGCAC TCTTCCTGGG AACGGTCGCT
ATCTTGCCGT TCATCACCCA ACAACTCACC GGTGTACCGA TTGGTCTGGG AGCGACTGCA
TTGCTCATTG TCGTCGGCGT CGCGGTCGAT ACAATGCGGC AACTCGAAGC GCAACTGGTG
ATGCGGAACT ACGAAGGGTT TATCAACCGT TGA
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| Protein sequence | MLESVVNALR LPDLRQRILF TLAMLLLFRL IAHIPVPNID PMALESLRLA LQGNQLAQLL
NIFAGGALQN LSVAAMGVYP YITAQIILQL LVPLIPALEE LRKEGEQGRM RLNRITFYLT
IPMALLQAYG QTLTLERSLR TGQALFQTPF DIVNNFFPTF TILMSMLAGT MLLVWLGEQI
QERGIGNGVS MIIFAGIVAG LPGLIIQAFT TVELGGLEQA IGLIAFLIIA LGTIIGIVLM
HEGQRRIPVQ YAKRVRGNRV YGGQSSHIPL KVNMAGMIPL IFAQSIIIFP GTIASYGCPE
QVAPPNASVL KQIACFTYQT FSPQYGGGTL VYSIALFVLV YFFTYFYTKV IFDQQNIPET
LQRNGGFIPG IRPGKRTEEY LDQVVSRITR IGALFLGTVA ILPFITQQLT GVPIGLGATA
LLIVVGVAVD TMRQLEAQLV MRNYEGFINR
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