| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3998 |
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| Symbol | rplQ |
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| ID | 5541508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5210589 |
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| End bp | 5210939 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896110 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001434049 |
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| Protein GI | 156743920 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.290769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000533541 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGACATC GCAAGAAAGG GTTTCTGCTT GGCAGAGACA AAGAACAGCG TGAAGCGTTG
ATCCGCGGGC TGATGATCGC ACTGATCGAG CATCGCCGCA TTACGACTAC GCTGGCAAAA
GCGAAAGCAG TGCAACCGGA AATCGAAAAA TTGATCGCAC TGGCGCGCCA GGATACGCCA
CATAACCGGC GGATGGCGCT TTCGCGCCTG GCGAGCAAGA CGGCGATGCG GCAACTCTTC
AGTTTCGCGC CAACCGAATA TGCCGATCGC ACCAGCGGGT TCACCCGCAT TACCAAATTG
GGGCAACGCC AGGGCGATGG CGCGACGATG GTGCAGATTG AATTGCTCTG A
|
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| Protein sequence | MRHRKKGFLL GRDKEQREAL IRGLMIALIE HRRITTTLAK AKAVQPEIEK LIALARQDTP
HNRRMALSRL ASKTAMRQLF SFAPTEYADR TSGFTRITKL GQRQGDGATM VQIELL
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