Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3995 |
Symbol | |
ID | 5541505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5208921 |
End bp | 5209319 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896107 |
Product | ribosomal protein S9 |
Protein accession | YP_001434046 |
Protein GI | 156743917 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.850021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000512267 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGAGA AGCGCTATTT TCAAGGGACC GGACGGCGTA AGACGGCCGT GGCACGGGTG CGTCTGTTTC CTGGCAGCGG TGACATCGTC GTCAACAGCA AATCGATCCG CGAGTATTTT GGCGCGCGCG AGTTGTATGC CCGCGAGATT GCCCGACCAC TCGAATTGAC CGGGACTGCC GGCGCCTACA ATGTTTTGGT CAAGGTGCGC GGCGGCGGCG TTAGCGGACA GGCACAGGCA GTACGCCACG GCATTACCCG CGCCCTGCTC GATGCCAATC CCGACTTTCG CCCGGTGCTG AAACAGGCCG GGTTGATCAC CCGCGACCCG CGCATGAAAG AACGCAAGAA AGCCGGTCTC AAACGTGCCC GCAAACGACC TCAGTATACA AAGCGGTAA
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Protein sequence | MIEKRYFQGT GRRKTAVARV RLFPGSGDIV VNSKSIREYF GARELYAREI ARPLELTGTA GAYNVLVKVR GGGVSGQAQA VRHGITRALL DANPDFRPVL KQAGLITRDP RMKERKKAGL KRARKRPQYT KR
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