Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3993 |
Symbol | |
ID | 5541503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5206997 |
End bp | 5207962 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896105 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001434044 |
Protein GI | 156743915 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000582662 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGGCA TCCATCAGGT TCACCTGCCG TTGCCTTTCC CGTTGCGAAT CGTGAATACC TATCTGATAC GCGATGGTGA AGGATGGACA GTTATCGACA CCGGTCTCAA CTATGCGCCT GGACAGGCTG CGTGGCACGA AGCATTCGCC AGGCACGGCG TCGATCCGCG TATGATCAAG CGCATTGTTC TAACCCACGC CCATCCCGAT CATTACGGCA TGGCAGGATG GCTCCAGGCG CTCTCGGATG CACCGGTGGC GCTTTCGGCA GGCGAGGCGG CGTTTGCCCG CGCACAATGG CATGCCGACT CACATGCCCA TGATGCGACT GCGACATTCT TCGGCGCCCA TGGTATGCCA CCTGATCTGA TGACCACGGT GGCGGACGAT ATTACACACC TGCGGATGAT GACCCACCCC GTACCATCGG TCGTCACGTA TCTGCCGGTC GGCGAACCGT TGCTGATTGG CGAGCGACTC TTCACACCCA TCGCCACACC GGGGCATAGC GATGACCATC TGGTGTTCTA CTGCGCCGAA GAGCGCCTGC TGATCTGCGG CGATGCCGTG CTTATCAAGA TCACGCCAAA CGTCGGTTTG TGGGGATGGA GTCGCGGTAA TCCGCTCGCG CAGTTCCTGG CGTCGCTCGA CCGCCTGGCA GAACTCGATG TGGCGCTGGC GCTTCCGGGA CATGGTCCGC TCATCACACG GTTCCATGAG CGCCTGGACG AATTGCGCGT TCATCATGTT GAACGGTTGG AGGCGATGGA ACATGCCATT GGCGCCGGGG CAACAGCCTA CGAGGTCTGC ACTGCGGTCT TTCCGCTGCA AGAGTTGACA TCCCATCAGA TGCGCTTCGC CATGGCGGAA ACGCTGGCGC ACCTGGAGTA TCTGGCAACA CAGGGACGGG TCGAACAGAT CGAACACGCT GACGGGACAC GCTCCTGGCG GCGGTGTGCA TTATGA
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Protein sequence | MEGIHQVHLP LPFPLRIVNT YLIRDGEGWT VIDTGLNYAP GQAAWHEAFA RHGVDPRMIK RIVLTHAHPD HYGMAGWLQA LSDAPVALSA GEAAFARAQW HADSHAHDAT ATFFGAHGMP PDLMTTVADD ITHLRMMTHP VPSVVTYLPV GEPLLIGERL FTPIATPGHS DDHLVFYCAE ERLLICGDAV LIKITPNVGL WGWSRGNPLA QFLASLDRLA ELDVALALPG HGPLITRFHE RLDELRVHHV ERLEAMEHAI GAGATAYEVC TAVFPLQELT SHQMRFAMAE TLAHLEYLAT QGRVEQIEHA DGTRSWRRCA L
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