Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3990 |
Symbol | |
ID | 5541500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5204025 |
End bp | 5205359 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896102 |
Product | replicative DNA helicase |
Protein accession | YP_001434041 |
Protein GI | 156743912 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000661916 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCAC TGCCCGATCT GCCGCAGAGC ATCGACGCTG AGAAAGCCAC CCTCGGCTCG ATCCTGCTCA ACCGGGATGC CATCATTGCG ATTGCACCCT GGTTGCAGGC GGAGTATTTT TACCTGCAAC GGCACGCGCA GATCTACGAG GCGATGCTGA CATGCTACAA TGCCCGCATT CCCCCTGATA CCCGCACCGT CGCCGAGGAA CTGCGCCGGC GCAATCAGCT CGAAGCCGTT GGCGGCGTTC TCTATCTGTC CGAACTGGTC GAGAGCGTTC CAACCTCGTA TCACGTTGAA TACTATGCCC GCATCGTCGA ACATACTGCG CTGCGCCGCC GCCTGATCAC CGCTGGAAGC AAGATCGCTG CGCTGGGGTA CGATGAGCAA CGGGATATCG AGGACACGCT CGATCTGGCT GAACAGACCC TCTTCGAGGT CTCGCAGCGG CGCATCAACC AGGATTTTGT TCACATCGGC CAGGTGATCG ATGCGTACTA TGAGCAGATC AACTATCTTC AGGAGCATCG CGGCGAGGTC GTGGGGCTGC CAACCGGCTT CCGCGACCTC GATCTCATCA CCGGCGGGTT GCAGCGCAGC GATCTGATTA TCCTTGCAGC GCGCCCAGGC GTCGGCAAGA CCAGCCTGGT GATGAGCATC GCCTATAATG TCGCTATGCA CTACCAGGGA ACGGTCGGCG TGTTCAGTCT GGAAATGAGC CGTGAGCAAC TGGTGCAGCG CCTGCTCTCA ATGGAAACGA CCATCGATAC GCACCGCCTG CGCCTGGGGC AACTCCGTGA GGACGAGATG GAGCGCGTGA TCAGCGCTAT GGGGCGTCTG GCTGCCGCGC CGATCTATAT CGAAGACTCT GCCGGGCTGA GCATTATGGA TGTGCGCAGC CGGGCGCGTC GGCTTCAGGC GCGCGCCGGC GTGGACTTGA TTATCATCGA CTATCTGCAA TTGATGCAGG GACGCCGCAC CGACAATCGC GTGCAAGAGG TGAGCGAGAT TTCGCGCGGT TTGAAGGCGC TGGCGCGTGA ACTCAACGTG CCGGTCATCG CTCTGTCGCA ACTTTCGCGC GCCGTCGAAG GGCGCACCAG CCACGTGCCT GTGCTGAGCG ACCTGCGCGA ATCGGGGTCG ATTGAGCAGG ACGCCGATAT TGTGATGTTT ATCTATCGCG AAGAGTTGTA TGATCCGAAC ACTGACAAAA AGGGTATCGC CGAGATCCAT ATCGCCAAAC ATCGCAATGG TCCGGTCGGC GTGGTGCCCA TGCGGTTTGA GCCATCGACC ACACGCTTCA TGGACCTGAC TTATCGCACG CCGGAAGGGT ATTAG
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Protein sequence | MTALPDLPQS IDAEKATLGS ILLNRDAIIA IAPWLQAEYF YLQRHAQIYE AMLTCYNARI PPDTRTVAEE LRRRNQLEAV GGVLYLSELV ESVPTSYHVE YYARIVEHTA LRRRLITAGS KIAALGYDEQ RDIEDTLDLA EQTLFEVSQR RINQDFVHIG QVIDAYYEQI NYLQEHRGEV VGLPTGFRDL DLITGGLQRS DLIILAARPG VGKTSLVMSI AYNVAMHYQG TVGVFSLEMS REQLVQRLLS METTIDTHRL RLGQLREDEM ERVISAMGRL AAAPIYIEDS AGLSIMDVRS RARRLQARAG VDLIIIDYLQ LMQGRRTDNR VQEVSEISRG LKALARELNV PVIALSQLSR AVEGRTSHVP VLSDLRESGS IEQDADIVMF IYREELYDPN TDKKGIAEIH IAKHRNGPVG VVPMRFEPST TRFMDLTYRT PEGY
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