| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3984 |
|---|
| Symbol | |
|---|
| ID | 5541494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5196213 |
|---|
| End bp | 5196509 |
|---|
| Gene Length | 297 bp |
|---|
| Protein Length | 98 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640896096 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, C subunit |
|---|
| Protein accession | YP_001434035 |
|---|
| Protein GI | 156743906 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
|---|
| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.854117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0232469 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGA CCATGGAAGA TGTGGAGCAC GTCGCACGCC TGGCGCGTCT GCGCCTTTCG
CCAGATGAAC TGGAGCATAT GCGCGATCAA TTGTCGAAGA TTCTTGATCA TTTTCAGATG
TTGCAGCAGA TCGATGTCAG CGCTGTTCCA CCAACTGCGC AGGTGACCGA TCTGATCAAT
GTGATGCGCG AGGATGAGGT GCGTCCGTCA CTGCCGCGCG AACAGGCGCT GGCAAACGCT
CCCGAACAAC AGGATGGAAT GTTTCGCGTC CGTGCCATCT TTGAAGAAGC GTCATAA
|
|---|
| Protein sequence | MLLTMEDVEH VARLARLRLS PDELEHMRDQ LSKILDHFQM LQQIDVSAVP PTAQVTDLIN
VMREDEVRPS LPREQALANA PEQQDGMFRV RAIFEEAS
|
|---|
| |