| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3981 |
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| Symbol | |
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| ID | 5541491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5191970 |
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| End bp | 5192959 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896093 |
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| Product | luciferase family protein |
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| Protein accession | YP_001434032 |
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| Protein GI | 156743903 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03557] F420-dependent oxidoreductase, G6PDH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0510411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAATCA TCGGATATGC CGCAGCCCTG GAACAGTTTC ATCCGAACGA TCTACTGGCA
TACTGCCAGC TCGCCGAGCA ACATGGCTTC AAGGGAGTAA TGGCAGCGGA TCATTTTCAG
CCGTGGGTGC CACAACAGGG GCACAGCGCC TTTGTCTGGA GTTGGATGGC CGCGCTCGGT
GCAACAACGC GCACCCTGAC GTTCGGTCCG GGTGTGACCT GCCCATCGTT CCGATACCAT
CCGGCGGTTG TGGCGCAGGC GGCTGCAACC CAGGCGGCGA TGACTCCCGG TCGTTTCTGG
TTGGGGTTGG GCAGCGGCGA GGCGCTGAAT GAACATGTCG TGGGTGGTGT CTGGCCCGAA
CCGCATATCC GTCTTCAGAT GCTTCAGGAA GCGGTCAGCA TTATTAAGAA ACTGTTCACC
GGCAAAGTTG CCCGGCACGA CGATGGGAAA TACTTCAAAA TGGAGCGGGT TCGTCTCTGG
ACATTGCCGC CGGATCCGCC ACCGATCTAC ATTGCGACGG CTGGACCGGT GACCGCCGAA
TGGACCGGAA GAGCGTGCGA TGGGATTATC ACGCCTGGCG CCAGCCCCGA TAAATTGCGG
ATGCTGCTAG GGAAATTCGA GGAGGGCGCG CGGAAAGCGG GGAAAGACCC TGCGCGAATG
CCGAAACTGC TTCAGTTGCA CATGTCGTGG GCGGAAACCG CTGAAGAGGC TATGCAGAAC
GCACTGACCG AATGGCCCAA CGGTGGCATG CCCTTCCCCA AGCAGGATAT TCGCAACCCG
GAAGATTTCG CCGAAATTGC CAAACTGGTG CGACCAGAAC ACTTCAAGAA CCGGATGTTG
ATCTCATCCG ATCTCGATGA ACATCGCGCA TACATTCAGC AGTTCATCGA TCTGGGATTT
GACGAGATTC ATGTGCACAA CGTTGGTCGC AATCAGGAGC AGTTCATCAA AGCGTTCAGC
GAACAGGTCA TTCCACGTCT CAAAGCATAA
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| Protein sequence | MVIIGYAAAL EQFHPNDLLA YCQLAEQHGF KGVMAADHFQ PWVPQQGHSA FVWSWMAALG
ATTRTLTFGP GVTCPSFRYH PAVVAQAAAT QAAMTPGRFW LGLGSGEALN EHVVGGVWPE
PHIRLQMLQE AVSIIKKLFT GKVARHDDGK YFKMERVRLW TLPPDPPPIY IATAGPVTAE
WTGRACDGII TPGASPDKLR MLLGKFEEGA RKAGKDPARM PKLLQLHMSW AETAEEAMQN
ALTEWPNGGM PFPKQDIRNP EDFAEIAKLV RPEHFKNRML ISSDLDEHRA YIQQFIDLGF
DEIHVHNVGR NQEQFIKAFS EQVIPRLKA
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