Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3975 |
Symbol | |
ID | 5541481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5181702 |
End bp | 5182787 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896083 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001434026 |
Protein GI | 156743897 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000585399 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00367656 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAAAA TTCTTCGTGC AGCGCTGATC GGCGCGGGCA TTATGGGTCT CAACCATGCG CGCGTGTATT CCGAAATGGA TGATGTCGAA CTGGTTGCCA TCGCCGATGT TGATCCGAAG ACGGTTGCGC GACTGATGCA GCGGTTCCGT GTGCGCGGCT ACACCGATTA TCGTGAATTG CTCGAACGGG AACAACTTGA TCTGGTCTCG GTGGTGGTGC CGACAGAGCA GCACTATGCA GTCGTTTGCG ATACGTTGCG CGCCGGGGTC GCCACGCTGG TCGAAAAACC GATTGCCGCC ACGGTCGCGC AAGGGGCAGA ACTGATCGCG CTGGCGCACG AAACCGGTGT GTTGCTTACG GTTGGTCATA TCGAACGGTT CAACCCGGCG ATCATCGTCC TAAAGGGACA ACTCGATCAC GGCGCTTTGG GGCGCGTCTA TCAAATTACA TCGCGCCGTA TCGGTCCGTT CCCTAGCCGC ATCAAAGATG TCGGCGTTGT CGTCGATCTG GCGACGCACG ATCTCGACAT CATGCACTAT CTGACCGACT CGATCGTCGT CAAGCTGCAT GCCGAGATTG GACGGCGCCT GCACACCGCG CACGAAGACC TGCTGGCGGC AGTGTTGCGC TTTGAGAATG ACGTGATCGG TATGCTCGAT ATCAACTGGC TCTCGCCCAA CAAAGTGCGT GAACTGTCGG TCATCGGCGA ACGCGGGATG TTCGTCGCCA ATTACATTAC GCAGGACCTG ACGCTCTACG AAAACGATCT GGCGCCCTAC GGAACGGAAT GGCCGCAGGC GGCGCTGATG GGTGTGACCG AAGGGCGTAT GATCCGCTTC AAAGTCAACA AAAAGGAGCC GCTGCGCGCC GAACTCGAAG CCTTCGCCGC TGCGGCGCGC TGCGGCGGTC CTGCGCCGGT GCGTCCGGAA GATGCGCTGC TGGCGCTCAT GGTCGCGCAG AAACTGGTCG AGTCCGGCGC GTATGGCGAG ACCCTGTGCG CAGTCGATGA TCACGGCGAA GTCTGGGAAC CGCTCCAACC GCGTCGTCGC CATCTCGCTG AACTCGAAGT CGGTGCGATC GCATAA
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Protein sequence | MAKILRAALI GAGIMGLNHA RVYSEMDDVE LVAIADVDPK TVARLMQRFR VRGYTDYREL LEREQLDLVS VVVPTEQHYA VVCDTLRAGV ATLVEKPIAA TVAQGAELIA LAHETGVLLT VGHIERFNPA IIVLKGQLDH GALGRVYQIT SRRIGPFPSR IKDVGVVVDL ATHDLDIMHY LTDSIVVKLH AEIGRRLHTA HEDLLAAVLR FENDVIGMLD INWLSPNKVR ELSVIGERGM FVANYITQDL TLYENDLAPY GTEWPQAALM GVTEGRMIRF KVNKKEPLRA ELEAFAAAAR CGGPAPVRPE DALLALMVAQ KLVESGAYGE TLCAVDDHGE VWEPLQPRRR HLAELEVGAI A
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